C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kaptin (actin binding protein)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118162 KPTN 9606 - 19:47475144-47484268 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338134 KPTN-001 47475144-47484268 protein_coding
  ENST00000594139 KPTN-006 47480557-47483578 retained_intron
  ENST00000594208 KPTN-002 47475193-47484162 nonsense_mediated_decay
  ENST00000595484 KPTN-003 47480692-47484265 processed_transcript
  ENST00000595554 KPTN-007 47476844-47484176 protein_coding
  ENST00000598699 KPTN-008 47480827-47483894 processed_transcript
  ENST00000600271 KPTN-005 47477721-47484219 protein_coding
  ENST00000600551 KPTN-009 47475150-47476187 processed_transcript
  ENST00000602193 KPTN-004 47480723-47484261 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338134ENST00000594139ENST00000594208ENST00000595484ENST00000595554ENST00000600271ENST00000600551ENST00000602193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338134 2.051±0.00 5.180±0.00 N/A 2.761±0.00 5.012±0.00 1.139±0.54 0.517±0.42 1.975±0.00 1.272±1.06 N/A 0.651±0.00 1.674±1.51 N/A 0.898±0.16
ENST00000594139 N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A 0.371±0.00 0.662±0.00 N/A N/A N/A 2.422±0.00
ENST00000594208 N/A N/A N/A 0.931±0.00 N/A N/A N/A 1.372±0.00 N/A 0.521±0.00 0.429±0.00 N/A 1.151±0.00 1.982±0.00
ENST00000595484 N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595554 N/A 1.661±0.00 N/A N/A N/A 1.728±0.00 N/A N/A N/A N/A N/A N/A N/A 1.374±0.00
ENST00000600271 N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A 1.417±0.00 0.979±0.00 1.498±0.30 N/A
ENST00000600551 N/A N/A 0.343±0.00 0.228±0.00 N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A
ENST00000602193 N/A N/A N/A N/A 0.347±0.00 N/A N/A 0.399±0.00 N/A N/A 0.809±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 TAS nucleus
GO:0005737 IEA cytoplasm
GO:0005815 TAS microtubule organizing center
GO:0006928 TAS cellular component movement
GO:0007015 TAS actin filament organization
GO:0007605 NAS sensory perception of sound
GO:0015629 TAS actin cytoskeleton
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015937 kptn kaptin (actin binding protein) protein_coding Danio_rerio
ENSMUSG00000006021 Kptn kaptin protein_coding Mus_musculus

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