C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kaptin (actin binding protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594208 KPTN-002 ENSG00000118162 9606 - 19:47475193-47484162 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungMusclePlacentaTestisENST00000594208
Transcript ID Brain Kidney Lung Muscle Placenta Testis
ENST00000594208 0.931±0.00 1.372±0.00 0.521±0.00 0.429±0.00 1.151±0.00 1.982±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006178 Kptn-001 protein_coding Mus_musculus 0 675
ENSMUST00000152044 Kptn-003 retained_intron Mus_musculus 0 488
ENSMUST00000130170 Kptn-002 retained_intron Mus_musculus 0 398
ENSMUST00000129080 Kptn-008 retained_intron Mus_musculus 0 333
ENSMUST00000149388 Kptn-004 retained_intron Mus_musculus 0 254
ENSMUST00000149255 Kptn-005 retained_intron Mus_musculus 2e-21 108

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