C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kaptin (actin binding protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338134 KPTN-001 ENSG00000118162 9606 - 19:47475144-47484268 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000338134
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000338134 2.051±0.00 5.180±0.00 2.761±0.00 5.012±0.00 1.139±0.54 0.517±0.42 1.975±0.00 1.272±1.06 0.651±0.00 1.674±1.51 0.898±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 TAS nucleus
GO:0005737 IEA cytoplasm
GO:0005815 TAS microtubule organizing center
GO:0006928 TAS cellular component movement
GO:0007015 TAS actin filament organization
GO:0007605 NAS sensory perception of sound
GO:0015629 TAS actin cytoskeleton
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006178 Kptn-001 protein_coding Mus_musculus 0 1245
ENSMUST00000152044 Kptn-003 retained_intron Mus_musculus 0 494
ENSMUST00000149388 Kptn-004 retained_intron Mus_musculus 0 492
ENSMUST00000130170 Kptn-002 retained_intron Mus_musculus 0 403
ENSMUST00000129080 Kptn-008 retained_intron Mus_musculus 0 333
ENSMUST00000149255 Kptn-005 retained_intron Mus_musculus 2e-21 108

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