C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: v-myb avian myeloblastosis viral oncogene homolog
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118513 MYB 9606 + 6:135181315-135219173 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316528 MYB-201 135181315-135219171 protein_coding
  ENST00000339290 MYB-013 135181315-135219167 nonsense_mediated_decay
  ENST00000341911 MYB-002 135181315-135219167 protein_coding
  ENST00000367812 MYB-006 135181315-135219167 nonsense_mediated_decay
  ENST00000367814 MYB-001 135181328-135219173 protein_coding
  ENST00000420123 MYB-005 135181421-135194542 protein_coding
  ENST00000430686 MYB-004 135186018-135194686 protein_coding
  ENST00000438901 MYB-020 135181514-135219167 nonsense_mediated_decay
  ENST00000442647 MYB-009 135181315-135219171 protein_coding
  ENST00000463282 MYB-007 135181315-135219167 nonsense_mediated_decay
  ENST00000524588 MYB-035 135181514-135217980 nonsense_mediated_decay
  ENST00000525002 MYB-031 135181514-135217980 nonsense_mediated_decay
  ENST00000525369 MYB-014 135181508-135219172 protein_coding
  ENST00000525477 MYB-008 135181315-135219167 nonsense_mediated_decay
  ENST00000525514 MYB-019 135181514-135219167 nonsense_mediated_decay
  ENST00000525940 MYB-015 135181514-135217980 nonsense_mediated_decay
  ENST00000526187 MYB-024 135181514-135217980 nonsense_mediated_decay
  ENST00000526320 MYB-029 135181514-135219167 nonsense_mediated_decay
  ENST00000526565 MYB-036 135181514-135217980 nonsense_mediated_decay
  ENST00000526889 MYB-030 135181514-135219167 nonsense_mediated_decay
  ENST00000527615 MYB-041 135181381-135203766 protein_coding
  ENST00000528015 MYB-023 135181514-135217980 nonsense_mediated_decay
  ENST00000528140 MYB-037 135181514-135217980 nonsense_mediated_decay
  ENST00000528343 MYB-033 135181514-135218006 nonsense_mediated_decay
  ENST00000528345 MYB-016 135181514-135217980 nonsense_mediated_decay
  ENST00000528774 MYB-038 135181514-135217980 protein_coding
  ENST00000529262 MYB-022 135181514-135217980 nonsense_mediated_decay
  ENST00000529297 MYB-012 135203217-135203950 processed_transcript
  ENST00000529586 MYB-034 135181514-135219167 nonsense_mediated_decay
  ENST00000531519 MYB-027 135181514-135219167 nonsense_mediated_decay
  ENST00000531634 MYB-026 135181514-135217980 nonsense_mediated_decay
  ENST00000531737 MYB-028 135181514-135217980 nonsense_mediated_decay
  ENST00000531845 MYB-003 135185877-135219171 processed_transcript
  ENST00000533384 MYB-025 135181514-135217980 nonsense_mediated_decay
  ENST00000533624 MYB-021 135181514-135217980 protein_coding
  ENST00000533808 MYB-032 135181514-135219167 nonsense_mediated_decay
  ENST00000533837 MYB-010 135181315-135219167 nonsense_mediated_decay
  ENST00000534044 MYB-017 135181514-135217980 protein_coding
  ENST00000534121 MYB-039 135181514-135217980 protein_coding
  ENST00000534736 MYB-040 135195748-135197323 nonsense_mediated_decay
  ENST00000616088 MYB-202 135181315-135219171 protein_coding
  ENST00000618728 MYB-203 135181315-135219167 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000316528ENST00000339290ENST00000341911ENST00000367812ENST00000367814ENST00000430686ENST00000438901ENST00000442647ENST00000525002ENST00000525369ENST00000525940ENST00000526187ENST00000526320ENST00000528343ENST00000528345ENST00000528774ENST00000531634ENST00000533624ENST00000616088
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000316528 N/A 0.272±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000339290 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A 0.484±0.00
ENST00000341911 N/A N/A N/A N/A N/A N/A N/A N/A 0.330±0.00 1.949±1.05 0.088±0.00 N/A
ENST00000367812 0.317±0.00 N/A 0.044±0.00 0.199±0.00 N/A N/A 0.059±0.00 0.032±0.00 N/A N/A 0.393±0.00 N/A
ENST00000367814 N/A N/A N/A 0.399±0.00 4.026±0.00 N/A N/A N/A N/A 2.686±1.89 N/A N/A
ENST00000430686 N/A N/A N/A 1.095±0.00 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A
ENST00000438901 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A 0.309±0.00 N/A N/A N/A
ENST00000442647 N/A N/A N/A N/A 0.960±0.24 N/A N/A N/A N/A 4.534±0.00 0.244±0.00 N/A
ENST00000525002 N/A N/A N/A N/A N/A N/A N/A N/A 0.594±0.00 N/A N/A N/A
ENST00000525369 N/A N/A N/A 0.265±0.00 2.582±0.00 N/A N/A 0.088±0.00 N/A N/A N/A 0.350±0.00
ENST00000525940 N/A N/A 0.528±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526187 N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A
ENST00000526320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A
ENST00000528343 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528345 N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528774 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.323±0.00 N/A N/A
ENST00000531634 N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533624 N/A N/A N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A 0.258±0.00
ENST00000616088 N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014P CIL_00014P_0002 CGP 6:134960378-135219173
CIL_0009AJ CIL_0009AJ_0001 VISTA 6:134980560-135582914

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 IEA G1/S transition of mitotic cell cycle
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IC RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001701 IEA in utero embryonic development
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005829 IEA cytosol
GO:0006338 IMP chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006816 IEA calcium ion transport
GO:0007596 TAS blood coagulation
GO:0010468 IEA regulation of gene expression
GO:0016363 NAS nuclear matrix
GO:0030183 IEA B cell differentiation
GO:0045624 IMP positive regulation of T-helper cell differentiation
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IEA thymus development
GO:0048566 IEA embryonic digestive tract development
GO:0048872 IEA homeostasis of number of cells
GO:0051571 IMP positive regulation of histone H3-K4 methylation
GO:0051574 IMP positive regulation of histone H3-K9 methylation
GO:0071354 IEA cellular response to interleukin-6
GO:0071987 IEA WD40-repeat domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053666 cmyb transcription factor cmyb protein_coding Danio_rerio
ENSMUSG00000019982 Myb myeloblastosis oncogene protein_coding Mus_musculus

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