C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myeloblastosis oncogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019982 Myb 10090 - 10:21124936-21160905 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020158 Myb-001 21125276-21160905 protein_coding
  ENSMUST00000186446 Myb-003 21138893-21160850 retained_intron
  ENSMUST00000188495 Myb-002 21124936-21160905 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020158ENSMUST00000186446ENSMUST00000188495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020158 0.629±0.44 0.028±0.00 0.050±0.00 0.537±0.33 2.429±1.03 11.235±3.29 0.063±0.03 0.080±0.07 7.351±0.84 1.701±0.16 0.028±0.01 0.975±0.49 2.303±2.36 0.083±0.01
ENSMUST00000186446 0.334±0.16 0.064±0.02 N/A 0.089±0.00 0.774±0.00 5.115±0.00 0.046±0.01 0.067±0.01 2.299±2.56 N/A N/A 0.727±0.22 1.106±1.03 0.077±0.03
ENSMUST00000188495 0.246±0.15 N/A 0.066±0.00 0.595±0.39 0.981±0.41 3.378±0.87 0.040±0.02 0.047±0.02 3.659±2.70 0.675±0.34 0.074±0.06 0.663±0.45 1.860±1.68 0.103±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0002 VISTA 10:20781770-21384133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001701 IMP in utero embryonic development
GO:0003677 IDA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 IDA cytosol
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006816 IMP calcium ion transport
GO:0010468 IMP regulation of gene expression
GO:0030183 IMP B cell differentiation
GO:0045624 IEA positive regulation of T-helper cell differentiation
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IMP thymus development
GO:0048566 IMP embryonic digestive tract development
GO:0048872 IMP homeostasis of number of cells
GO:0051571 IEA positive regulation of histone H3-K4 methylation
GO:0051574 IEA positive regulation of histone H3-K9 methylation
GO:0071354 IDA cellular response to interleukin-6
GO:0071987 IDA WD40-repeat domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053666 cmyb transcription factor cmyb protein_coding Danio_rerio
ENSG00000118513 MYB v-myb avian myeloblastosis viral oncogene homolog protein_coding Homo_sapiens

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