C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: olfactomedin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118733 OLFM3 9606 - 1:101802574-101997030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338858 OLFM3-001 101803486-101846973 protein_coding
  ENST00000370103 OLFM3-003 101802574-101997030 protein_coding
  ENST00000462354 OLFM3-004 101803486-101996905 processed_transcript
  ENST00000465523 OLFM3-002 101803486-101846973 processed_transcript
  ENST00000468901 OLFM3-005 101825090-101910154 processed_transcript
  ENST00000536598 OLFM3-201 101803486-101837029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000338858ENST00000370103ENST00000468901
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000338858 N/A 4.502±1.83 0.018±0.00 0.276±0.00 N/A 0.080±0.00 0.144±0.00 0.067±0.00 0.008±0.00 0.013±0.00 0.039±0.00
ENST00000370103 0.006±0.00 5.275±1.25 0.036±0.00 0.065±0.00 0.006±0.00 0.125±0.00 N/A N/A 0.018±0.00 N/A 0.023±0.00
ENST00000468901 N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Y CIL_00072Y_0003 CGP 1:101802574-103108496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005615 IEA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0030054 IEA cell junction
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0042462 IEA eye photoreceptor cell development
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039174 olfm3b olfactomedin 3b protein_coding Danio_rerio
ENSDARG00000071493 olfm3a olfactomedin 3a protein_coding Danio_rerio
ENSMUSG00000027965 Olfm3 olfactomedin 3 protein_coding Mus_musculus

Loading