C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactomedin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338858 OLFM3-001 ENSG00000118733 9606 - 1:101803486-101846973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000338858
Transcript ID Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000338858 4.502±1.83 0.018±0.00 0.276±0.00 0.080±0.00 0.144±0.00 0.067±0.00 0.008±0.00 0.013±0.00 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Y CIL_00072Y_0003 CGP 1:101802574-103108496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005615 IEA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0030054 IEA cell junction
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0042462 IEA eye photoreceptor cell development
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051309 Olfm3-002 protein_coding Mus_musculus 0 2466
ENSMUST00000081752 Olfm3-001 protein_coding Mus_musculus 0 2289
ENSMUST00000149158 Olfm3-003 protein_coding Mus_musculus 0 763

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