C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00072Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039174-ENSDARG00000009014 CGP 7955 2:15163713-15383777
GeneTranscriptPositionBiotype
ENSDARG00000009014 (col11a1b)
collagen, type XI, alpha 1b 		ENSDART00000049589 (col11a1b-001) 15209776-15383777 protein_coding
ENSDARG00000039174 (olfm3b)
olfactomedin 3b 		ENSDART00000057238 (olfm3b-001) 15163713-15169965 protein_coding
CIL_00072Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071493-ENSDARG00000026165 CGP 7955 24:29608812-29815828
GeneTranscriptPositionBiotype
ENSDARG00000026165 (col11a1a)
collagen, type XI, alpha 1a 		ENSDART00000003503 (col11a1a-001) 29686546-29815828 protein_coding
ENSDART00000042065 (col11a1a-002) 29687357-29815776 protein_coding
ENSDARG00000071493 (olfm3a)
olfactomedin 3a 		ENSDART00000105753 (olfm3a-001) 29608812-29633701 protein_coding
ENSDARG00000097841 (si:ch211-266k13.3)
si:ch211-266k13.3 		ENSDART00000153933 (si:ch211-266k13.3-001) 29573619-29578464 antisense
ENSDART00000154443 (si:ch211-266k13.3-003) 29614439-29701893 antisense
ENSDART00000154555 (si:ch211-266k13.3-002) 29573659-29701227 antisense
CIL_00072Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118733-ENSG00000060718 CGP 9606 1:101802574-103108496
GeneTranscriptPositionBiotype
ENSG00000060718 (COL11A1)
collagen, type XI, alpha 1 		ENST00000353414 (COL11A1-201) 102876468-103108496 protein_coding
ENST00000358392 (COL11A1-202) 102876467-103108496 protein_coding
ENST00000370096 (COL11A1-001) 102876467-103108491 protein_coding
ENST00000427239 (COL11A1-002) 103008473-103108178 protein_coding
ENST00000447608 (COL11A1-003) 103030901-103082859 protein_coding
ENST00000461720 (COL11A1-004) 103001014-103008493 processed_transcript
ENST00000465209 (COL11A1-006) 102961745-102962684 retained_intron
ENST00000470170 (COL11A1-007) 102877717-102880018 retained_intron
ENST00000475980 (COL11A1-005) 103001437-103004481 processed_transcript
ENST00000512756 (COL11A1-008) 102877951-103108479 protein_coding
ENSG00000118733 (OLFM3)
olfactomedin 3 		ENST00000338858 (OLFM3-001) 101803486-101846973 protein_coding
ENST00000370103 (OLFM3-003) 101802574-101997030 protein_coding
ENST00000462354 (OLFM3-004) 101803486-101996905 processed_transcript
ENST00000465523 (OLFM3-002) 101803486-101846973 processed_transcript
ENST00000468901 (OLFM3-005) 101825090-101910154 processed_transcript
ENST00000536598 (OLFM3-201) 101803486-101837029 protein_coding
ENSG00000162699 (DNAJA1P5)
DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 5 		ENST00000440278 (DNAJA1P5-001) 101893105-101894047 processed_pseudogene
ENSG00000230864 (RP5-936J12.1)
 ENST00000414418 (RP5-936J12.1-001) 102763322-102853842 lincRNA
ENSG00000233359 (RP11-202K23.1)
 ENST00000447916 (RP11-202K23.1-001) 102199739-102389630 lincRNA
ENSG00000234257 (SOD2P1)
superoxide dismutase 2, mitochondrial pseudogene 1 		ENST00000396543 (SOD2P1-001) 103100143-103100704 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072Y_0001ENSDARG00000009014ENSDART00000049589ENSDARG00000039174ENSDART00000057238CIL_00072Y_0002ENSDARG00000026165ENSDART00000003503ENSDART00000042065ENSDARG00000071493ENSDART00000105753ENSDARG00000097841ENSDART00000153933ENSDART00000154443ENSDART00000154555CIL_00072Y_0003ENSG00000060718ENST00000353414ENST00000358392ENST00000370096ENST00000427239ENST00000447608ENST00000461720ENST00000465209ENST00000470170ENST00000475980ENST00000512756ENSG00000118733ENST00000338858ENST00000370103ENST00000462354ENST00000465523ENST00000468901ENST00000536598ENSG00000162699ENST00000440278ENSG00000230864ENST00000414418ENSG00000233359ENST00000447916ENSG00000234257ENST00000396543
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00072Y_0001ENSDARG00000009014ENSDART00000049589ENSDARG00000039174ENSDART00000057238CIL_00072Y_0002ENSDARG00000026165ENSDART00000003503ENSDART00000042065ENSDARG00000071493ENSDART00000105753ENSDARG00000097841ENSDART00000153933ENSDART00000154555CIL_00072Y_0003ENSG00000060718ENST00000353414ENST00000370096ENST00000427239ENST00000461720ENST00000470170ENST00000512756ENSG00000118733ENST00000338858ENST00000370103ENST00000468901ENSG00000162699ENST00000440278ENSG00000230864ENST00000414418ENSG00000233359ENST00000447916ENSG00000234257ENST00000396543
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009014 ENSDART00000049589 N/A N/A N/A 0.170±0.07 N/A N/A 0.237±0.16 2.080±1.01 0.005±0.00 N/A 1.181±0.00 N/A N/A N/A
ENSDARG00000039174 ENSDART00000057238 N/A N/A N/A 1.953±1.62 N/A N/A 0.177±0.12 0.273±0.13 0.049±0.00 N/A 0.185±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026165 ENSDART00000003503 N/A N/A N/A 0.354±0.00 N/A N/A 0.025±0.01 0.095±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000042065 N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.040±0.00 N/A N/A N/A
ENSDARG00000071493 ENSDART00000105753 N/A N/A N/A 7.796±1.26 N/A N/A N/A 0.153±0.00 0.017±0.00 N/A 0.357±0.00 N/A N/A N/A
ENSDARG00000097841 ENSDART00000153933 N/A N/A N/A N/A N/A N/A N/A 0.895±0.00 0.138±0.00 N/A N/A N/A N/A N/A
ENSDART00000154443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154555 N/A N/A N/A N/A N/A N/A 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000060718 ENST00000353414 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A 0.339±0.00 0.086±0.00
ENST00000358392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370096 N/A N/A N/A 0.383±0.10 0.924±0.52 N/A N/A N/A 0.081±0.00 N/A N/A 0.683±0.38 1.377±0.39 N/A
ENST00000427239 N/A N/A 0.041±0.00 N/A 1.287±0.00 N/A N/A 0.064±0.00 N/A 0.136±0.00 N/A N/A N/A N/A
ENST00000447608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461720 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A 1.712±0.00
ENST00000465209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470170 N/A 0.014±0.00 N/A N/A 1.212±0.00 N/A N/A N/A N/A N/A N/A 2.084±0.72 1.858±0.00 0.849±0.58
ENST00000475980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512756 N/A N/A N/A 0.192±0.00 0.556±0.04 0.020±0.01 N/A 0.043±0.03 0.157±0.00 N/A 0.182±0.15 0.576±0.19 1.771±0.51 0.439±0.22
ENSG00000118733 ENST00000338858 N/A N/A N/A 4.502±1.83 0.018±0.00 0.276±0.00 N/A 0.080±0.00 0.144±0.00 0.067±0.00 N/A 0.008±0.00 0.013±0.00 0.039±0.00
ENST00000370103 0.006±0.00 N/A N/A 5.275±1.25 0.036±0.00 0.065±0.00 0.006±0.00 0.125±0.00 N/A N/A N/A 0.018±0.00 N/A 0.023±0.00
ENST00000462354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468901 N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000536598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162699 ENST00000440278 N/A N/A N/A 0.426±0.00 N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A 0.239±0.00
ENSG00000230864 ENST00000414418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.03
ENSG00000233359 ENST00000447916 N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A 0.345±0.00
ENSG00000234257 ENST00000396543 N/A N/A N/A N/A 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading