C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major facilitator superfamily domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118855 MFSD1 9606 + 3:158732198-158829719 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264266 MFSD1-018 158802091-158829116 protein_coding
  ENST00000392813 MFSD1-201 158801926-158829718 protein_coding
  ENST00000415822 MFSD1-001 158801865-158829719 protein_coding
  ENST00000465235 MFSD1-006 158822443-158829718 retained_intron
  ENST00000465624 MFSD1-016 158819547-158829163 retained_intron
  ENST00000465739 MFSD1-012 158747577-158805474 protein_coding
  ENST00000468409 MFSD1-017 158823194-158824476 retained_intron
  ENST00000471266 MFSD1-007 158802137-158809261 nonsense_mediated_decay
  ENST00000471500 MFSD1-005 158802156-158829715 nonsense_mediated_decay
  ENST00000474670 MFSD1-008 158802379-158813981 protein_coding
  ENST00000476860 MFSD1-010 158804231-158809273 retained_intron
  ENST00000477743 MFSD1-015 158809237-158823486 protein_coding
  ENST00000480292 MFSD1-003 158802057-158829716 nonsense_mediated_decay
  ENST00000482835 MFSD1-009 158802486-158807440 protein_coding
  ENST00000484166 MFSD1-002 158802051-158829716 nonsense_mediated_decay
  ENST00000486568 MFSD1-013 158732198-158807421 protein_coding
  ENST00000489639 MFSD1-014 158809002-158819706 retained_intron
  ENST00000491804 MFSD1-011 158732357-158804371 protein_coding
  ENST00000622669 MFSD1-202 158801926-158829718 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264266ENST00000392813ENST00000465235ENST00000471266ENST00000471500ENST00000476860ENST00000484166ENST00000622669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264266 N/A N/A 4.412±0.00 N/A 4.404±0.00 5.268±0.00 N/A 5.730±0.00 7.141±0.00 7.227±0.00 1.412±0.00 N/A N/A N/A
ENST00000392813 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.812±0.00 N/A N/A N/A N/A
ENST00000465235 N/A N/A 2.148±0.00 N/A 2.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.008±0.00 49.981±0.00 N/A
ENST00000471500 10.216±0.00 N/A N/A 5.113±0.00 14.748±0.00 2.893±0.00 7.813±0.00 19.739±0.00 11.568±0.00 4.459±0.00 1.185±0.00 10.226±2.35 12.780±0.26 7.627±0.45
ENST00000476860 N/A N/A N/A 12.783±0.00 20.843±0.00 15.971±0.00 4.280±0.00 13.519±0.00 25.968±0.00 28.748±0.00 4.143±0.00 N/A N/A N/A
ENST00000484166 10.458±0.00 15.009±0.00 N/A 3.471±1.01 11.305±0.00 10.627±0.00 3.487±2.90 8.251±4.84 6.507±0.00 7.538±0.26 0.225±0.00 N/A N/A 6.821±0.00
ENST00000622669 N/A N/A N/A 1.342±0.00 5.937±0.00 2.345±0.00 0.451±0.00 N/A N/A N/A 0.941±0.00 8.302±0.00 10.149±1.61 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000808 CIL_000808_0001 VISTA 3:158183764-158784540
CIL_000815 CIL_000815_0001 VISTA 3:158228062-158828791
CIL_000937 CIL_000937_0001 VISTA 3:158468467-159075583
CIL_0001ZA CIL_0001ZA_0001 CGP 3:158645822-158732696
CIL_0004JT CIL_0004JT_0002 CGP 3:158696892-158829719

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076444 CABZ01033130.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000027775 Mfsd1 major facilitator superfamily domain containing 1 protein_coding Mus_musculus

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