C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004JT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043102-ENSDARG00000076444 CGP 7955 15:1177986-1209347
GeneTranscriptPositionBiotype
ENSDARG00000063624 (gfm1)
G elongation factor, mitochondrial 1 		ENSDART00000093152 (gfm1-001) 1163682-1191575 protein_coding
ENSDARG00000076444 (CABZ01033130.1)
Uncharacterized protein 		ENSDART00000111047 (CABZ01033130.1-201) 1196108-1209347 protein_coding
CIL_0004JT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118849-ENSG00000118855 CGP 9606 3:158696892-158829719
GeneTranscriptPositionBiotype
ENSG00000118849 (RARRES1)
retinoic acid receptor responder (tazarotene induced) 1 		ENST00000237696 (RARRES1-001) 158696892-158732696 protein_coding
ENST00000462663 (RARRES1-005) 158698121-158710872 processed_transcript
ENST00000471444 (RARRES1-004) 158704791-158705708 processed_transcript
ENST00000479756 (RARRES1-002) 158704651-158732442 protein_coding
ENST00000498640 (RARRES1-003) 158704809-158732489 processed_transcript
ENSG00000118855 (MFSD1)
major facilitator superfamily domain containing 1 		ENST00000264266 (MFSD1-018) 158802091-158829116 protein_coding
ENST00000392813 (MFSD1-201) 158801926-158829718 protein_coding
ENST00000415822 (MFSD1-001) 158801865-158829719 protein_coding
ENST00000465235 (MFSD1-006) 158822443-158829718 retained_intron
ENST00000465624 (MFSD1-016) 158819547-158829163 retained_intron
ENST00000465739 (MFSD1-012) 158747577-158805474 protein_coding
ENST00000468409 (MFSD1-017) 158823194-158824476 retained_intron
ENST00000471266 (MFSD1-007) 158802137-158809261 nonsense_mediated_decay
ENST00000471500 (MFSD1-005) 158802156-158829715 nonsense_mediated_decay
ENST00000474670 (MFSD1-008) 158802379-158813981 protein_coding
ENST00000476860 (MFSD1-010) 158804231-158809273 retained_intron
ENST00000477743 (MFSD1-015) 158809237-158823486 protein_coding
ENST00000480292 (MFSD1-003) 158802057-158829716 nonsense_mediated_decay
ENST00000482835 (MFSD1-009) 158802486-158807440 protein_coding
ENST00000484166 (MFSD1-002) 158802051-158829716 nonsense_mediated_decay
ENST00000486568 (MFSD1-013) 158732198-158807421 protein_coding
ENST00000489639 (MFSD1-014) 158809002-158819706 retained_intron
ENST00000491804 (MFSD1-011) 158732357-158804371 protein_coding
ENST00000622669 (MFSD1-202) 158801926-158829718 protein_coding
ENSG00000240207 (RP11-379F4.4)
 ENST00000465477 (RP11-379F4.4-004) 158732327-158784070 antisense
ENST00000468242 (RP11-379F4.4-003) 158732378-158771089 antisense
ENST00000477589 (RP11-379F4.4-001) 158740417-158743592 antisense
ENST00000495318 (RP11-379F4.4-005) 158732263-158737062 antisense
ENST00000496842 (RP11-379F4.4-002) 158740426-158743336 antisense
ENST00000607426 (RP11-379F4.4-006) 158735721-158737905 antisense
ENSG00000243675 (RP11-379F4.1)
 ENST00000460866 (RP11-379F4.1-001) 158763431-158763753 processed_pseudogene
ENSG00000271778 (RP11-379F4.8)
 ENST00000606839 (RP11-379F4.8-001) 158782547-158783124 sense_intronic
CIL_0004JT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049404-ENSMUSG00000027775 CGP 10090 3:67478886-67604231
GeneTranscriptPositionBiotype
ENSMUSG00000027775 (Mfsd1)
major facilitator superfamily domain containing 1 		ENSMUST00000029344 (Mfsd1-201) 67582768-67604231 protein_coding
ENSMUSG00000049404 (Rarres1)
retinoic acid receptor responder (tazarotene induced) 1 		ENSMUST00000054825 (Rarres1-001) 67478972-67515523 protein_coding
ENSMUST00000178314 (Rarres1-201) 67478886-67515523 protein_coding
ENSMUSG00000077459 (Gm25919)
predicted gene, 25919 		ENSMUST00000104271 (Gm25919-201) 67573160-67573291 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JT_0001ENSDARG00000063624ENSDART00000093152ENSDARG00000076444ENSDART00000111047CIL_0004JT_0002ENSG00000118849ENST00000237696ENST00000462663ENST00000471444ENST00000479756ENST00000498640ENSG00000118855ENST00000264266ENST00000392813ENST00000415822ENST00000465235ENST00000465624ENST00000465739ENST00000468409ENST00000471266ENST00000471500ENST00000474670ENST00000476860ENST00000477743ENST00000480292ENST00000482835ENST00000484166ENST00000486568ENST00000489639ENST00000491804ENST00000622669ENSG00000240207ENST00000465477ENST00000468242ENST00000477589ENST00000495318ENST00000496842ENST00000607426ENSG00000243675ENST00000460866ENSG00000271778ENST00000606839CIL_0004JT_0003ENSMUSG00000027775ENSMUST00000029344ENSMUSG00000049404ENSMUST00000054825ENSMUST00000178314ENSMUSG00000077459ENSMUST00000104271
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JT_0001ENSDARG00000063624ENSDART00000093152ENSDARG00000076444ENSDART00000111047CIL_0004JT_0002ENSG00000118849ENST00000237696ENSG00000118855ENST00000264266ENST00000392813ENST00000465235ENST00000471266ENST00000471500ENST00000476860ENST00000484166ENST00000622669ENSG00000240207ENST00000465477ENST00000607426ENSG00000243675ENST00000460866ENSG00000271778ENST00000606839CIL_0004JT_0003ENSMUSG00000027775ENSMUST00000029344ENSMUSG00000049404ENSMUST00000054825ENSMUST00000178314ENSMUSG00000077459ENSMUST00000104271
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063624 ENSDART00000093152 N/A N/A N/A 5.927±3.72 N/A N/A 9.383±0.51 2.469±0.57 6.141±0.00 N/A 7.933±0.00 N/A N/A N/A
ENSDARG00000076444 ENSDART00000111047 N/A N/A N/A 2.870±3.76 N/A N/A 3.239±2.84 0.770±0.01 0.800±0.00 N/A 2.650±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118849 ENST00000237696 10.218±0.00 25.993±0.00 N/A N/A 3.971±0.00 28.316±0.00 N/A N/A N/A 3.127±0.00 0.426±0.21 24.396±19.11 N/A 14.433±0.00
ENST00000462663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118855 ENST00000264266 N/A N/A 4.412±0.00 N/A 4.404±0.00 5.268±0.00 N/A 5.730±0.00 7.141±0.00 7.227±0.00 1.412±0.00 N/A N/A N/A
ENST00000392813 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.812±0.00 N/A N/A N/A N/A
ENST00000415822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465235 N/A N/A 2.148±0.00 N/A 2.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.008±0.00 49.981±0.00 N/A
ENST00000471500 10.216±0.00 N/A N/A 5.113±0.00 14.748±0.00 2.893±0.00 7.813±0.00 19.739±0.00 11.568±0.00 4.459±0.00 1.185±0.00 10.226±2.35 12.780±0.26 7.627±0.45
ENST00000474670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476860 N/A N/A N/A 12.783±0.00 20.843±0.00 15.971±0.00 4.280±0.00 13.519±0.00 25.968±0.00 28.748±0.00 4.143±0.00 N/A N/A N/A
ENST00000477743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484166 10.458±0.00 15.009±0.00 N/A 3.471±1.01 11.305±0.00 10.627±0.00 3.487±2.90 8.251±4.84 6.507±0.00 7.538±0.26 0.225±0.00 N/A N/A 6.821±0.00
ENST00000486568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622669 N/A N/A N/A 1.342±0.00 5.937±0.00 2.345±0.00 0.451±0.00 N/A N/A N/A 0.941±0.00 8.302±0.00 10.149±1.61 N/A
ENSG00000240207 ENST00000465477 N/A N/A N/A 3.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A 3.924±0.00
ENSG00000243675 ENST00000460866 N/A N/A N/A 0.094±0.00 0.046±0.00 0.256±0.00 N/A 0.091±0.00 N/A 0.216±0.00 N/A 0.226±0.00 N/A 0.041±0.00
ENSG00000271778 ENST00000606839 0.079±0.00 0.175±0.00 N/A 0.235±0.10 0.575±0.38 0.268±0.00 0.080±0.02 0.393±0.00 0.311±0.30 0.173±0.00 0.067±0.00 0.425±0.29 N/A 0.332±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027775 ENSMUST00000029344 25.584±8.98 85.246±25.09 20.382±1.54 7.159±4.31 35.175±17.26 31.804±11.34 6.813±1.59 125.692±29.51 31.680±20.23 37.656±13.35 5.992±0.40 44.445±20.71 29.771±23.69 3.872±1.49
ENSMUSG00000049404 ENSMUST00000054825 1.173±0.47 N/A 0.351±0.12 0.209±0.16 1.796±0.52 1.370±0.14 0.359±0.05 0.855±0.49 6.358±6.05 0.759±0.43 0.326±0.14 0.260±0.17 0.851±0.45 2.123±0.70
ENSMUST00000178314 N/A 2.279±1.05 N/A 0.299±0.00 1.816±0.61 1.093±0.17 N/A 0.700±0.35 4.114±5.22 0.653±0.64 0.189±0.12 0.256±0.11 0.980±0.57 0.825±0.12
ENSMUSG00000077459 ENSMUST00000104271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 114.379±0.00

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