C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 46, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119457 SLC46A2 9606 - 9:112878920-112890913 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374228 SLC46A2-001 112878920-112890913 protein_coding
  ENST00000491462 SLC46A2-002 112879257-112890810 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000491462
Transcript ID Lung
ENST00000491462 7.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X4 CIL_0005X4_0001 CGP 9:112683926-112881671
CIL_0000Y7 CIL_0000Y7_0001 CGP 9:112750838-112890913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0009986 IEA cell surface
GO:0015293 NAS symporter activity
GO:0016021 NAS:IEA integral component of membrane
GO:0043029 IEA T cell homeostasis
GO:0045580 IEA regulation of T cell differentiation
GO:0048538 IEA thymus development
GO:0055085 IEA transmembrane transport
GO:0070233 IEA negative regulation of T cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075229 SLC46A2 solute carrier family 46, member 2 protein_coding Danio_rerio
ENSMUSG00000028386 Slc46a2 solute carrier family 46, member 2 protein_coding Mus_musculus

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