C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Y7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148158-ENSG00000119457 CGP 9606 9:112750838-112890913
GeneTranscriptPositionBiotype
ENSG00000148158 (SNX30)
sorting nexin family member 30 		ENST00000374232 (SNX30-001) 112750838-112874987 protein_coding
ENST00000416585 (SNX30-002) 112838585-112866525 protein_coding
ENST00000604751 (SNX30-003) 112856708-112881671 processed_transcript
ENSG00000271631 (RP11-408O19.5)
 ENST00000605480 (RP11-408O19.5-001) 112885158-112885767 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0000Y7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028385-ENSMUSG00000028386 CGP 10090 4:59805840-59915056
GeneTranscriptPositionBiotype
ENSMUSG00000028385 (Snx30)
sorting nexin family member 30 		ENSMUST00000030080 (Snx30-001) 59805840-59904737 protein_coding
ENSMUST00000123665 (Snx30-004) 59805880-59834106 processed_transcript
ENSMUST00000143185 (Snx30-003) 59884780-59894554 processed_transcript
ENSMUST00000145199 (Snx30-002) 59884694-59900533 processed_transcript
ENSMUSG00000028386 (Slc46a2)
solute carrier family 46, member 2 		ENSMUST00000030081 (Slc46a2-001) 59905126-59915056 protein_coding
ENSMUSG00000073843 (Gm12542)
predicted gene 12542 		ENSMUST00000133015 (Gm12542-001) 59889986-59894924 antisense

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Y7_0001ENSG00000148158ENST00000374232ENST00000416585ENST00000604751ENSG00000271631ENST00000605480CIL_0000Y7_0002ENSMUSG00000028385ENSMUST00000030080ENSMUST00000123665ENSMUST00000143185ENSMUST00000145199ENSMUSG00000028386ENSMUST00000030081ENSMUSG00000073843ENSMUST00000133015
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Y7_0001ENSG00000148158ENST00000374232ENSG00000271631ENST00000605480CIL_0000Y7_0002ENSMUSG00000028385ENSMUST00000030080ENSMUST00000123665ENSMUST00000145199ENSMUSG00000028386ENSMUST00000030081ENSMUSG00000073843ENSMUST00000133015
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148158 ENST00000374232 2.369±0.00 0.614±0.00 2.510±0.00 8.220±3.19 1.804±0.96 2.538±1.01 0.650±0.29 2.640±1.50 1.688±0.23 5.370±1.46 0.652±0.00 1.964±0.68 0.768±0.61 7.383±1.26
ENST00000416585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271631 ENST00000605480 N/A 0.030±0.00 N/A N/A N/A N/A 0.242±0.23 0.480±0.42 N/A 0.460±0.32 N/A 0.076±0.03 N/A 0.214±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028385 ENSMUST00000030080 1.929±0.72 1.130±0.24 2.471±0.37 4.245±0.24 3.543±1.41 1.734±0.18 0.628±0.14 2.753±0.65 1.343±0.39 2.242±1.43 0.464±0.18 2.275±0.68 8.381±3.02 0.369±0.14
ENSMUST00000123665 N/A 1.453±0.26 N/A N/A N/A 1.523±0.00 N/A N/A N/A N/A N/A 1.916±0.19 N/A N/A
ENSMUST00000143185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00
ENSMUSG00000028386 ENSMUST00000030081 0.022±0.01 0.023±0.00 0.456±0.17 0.016±0.01 0.204±0.20 0.021±0.00 0.291±0.09 0.054±0.01 0.002±0.00 1.068±0.31 0.038±0.02 0.093±0.05 0.086±0.10 0.211±0.24
ENSMUSG00000073843 ENSMUST00000133015 0.086±0.04 N/A 0.117±0.10 0.129±0.08 0.253±0.08 0.110±0.01 0.338±0.05 0.087±0.03 0.062±0.04 0.126±0.05 0.082±0.00 0.257±0.07 0.258±0.12 0.058±0.00

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