C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119514 GALNT12 9606 + 9:98807699-98850081 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375011 GALNT12-001 98807699-98850081 protein_coding
  ENST00000470473 GALNT12-002 98848772-98849634 processed_transcript
  ENST00000610463 GALNT12-003 98808003-98835355 nonsense_mediated_decay
  ENST00000615204 GALNT12-004 98837075-98844522 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375011ENST00000610463ENST00000615204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375011 0.910±0.00 0.653±0.00 0.157±0.00 0.398±0.09 0.697±0.22 6.141±2.32 0.065±0.00 0.652±0.61 0.761±0.75 1.646±0.25 0.028±0.00 1.211±0.70 0.799±0.16 1.409±0.10
ENST00000610463 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.995±0.00 N/A N/A N/A N/A
ENST00000615204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000201 CIL_000201_0001 CGP 9:98731329-98850081
CIL_000200 CIL_000200_0001 CGP 9:98807699-99070792

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055490 galnt12 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 protein_coding Danio_rerio
ENSMUSG00000039774 Galnt12 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 protein_coding Mus_musculus

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