C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000201_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165138-ENSG00000119514 CGP 9606 9:98731329-98850081
GeneTranscriptPositionBiotype
ENSG00000119514 (GALNT12)
polypeptide N-acetylgalactosaminyltransferase 12 		ENST00000375011 (GALNT12-001) 98807699-98850081 protein_coding
ENST00000470473 (GALNT12-002) 98848772-98849634 processed_transcript
ENST00000610463 (GALNT12-003) 98808003-98835355 nonsense_mediated_decay
ENST00000615204 (GALNT12-004) 98837075-98844522 retained_intron
ENSG00000165138 (ANKS6)
ankyrin repeat and sterile alpha motif domain containing 6 		ENST00000353234 (ANKS6-006) 98732019-98796539 protein_coding
ENST00000375019 (ANKS6-002) 98731996-98796965 protein_coding
ENST00000444472 (ANKS6-001) 98731329-98777426 protein_coding
ENST00000466120 (ANKS6-004) 98783950-98790496 processed_transcript
ENST00000471846 (ANKS6-007) 98789911-98796539 processed_transcript
ENST00000486778 (ANKS6-005) 98783570-98784468 processed_transcript
CIL_000201_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066191-ENSMUSG00000039774 CGP 10090 4:47015669-47123070
GeneTranscriptPositionBiotype
ENSMUSG00000039774 (Galnt12)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 		ENSMUST00000045041 (Galnt12-001) 47091909-47123070 protein_coding
ENSMUST00000107744 (Galnt12-002) 47091923-47123043 protein_coding
ENSMUSG00000066191 (Anks6)
ankyrin repeat and sterile alpha motif domain containing 6 		ENSMUST00000084616 (Anks6-201) 47015689-47057306 protein_coding
ENSMUST00000107747 (Anks6-001) 47015669-47057306 protein_coding
ENSMUST00000152479 (Anks6-002) 47017000-47025710 processed_transcript
ENSMUST00000154664 (Anks6-003) 47038425-47040143 processed_transcript
ENSMUSG00000081561 (Gm12425)
predicted gene 12425 		ENSMUST00000119580 (Gm12425-001) 47041598-47041960 processed_pseudogene
ENSMUSG00000084199 (Gm12422)
predicted gene 12422 		ENSMUST00000121431 (Gm12422-001) 47071646-47071947 processed_pseudogene
ENSMUSG00000094286 (Gm12424)
predicted gene 12424 		ENSMUST00000179673 (Gm12424-001) 47101032-47101478 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000201_0001ENSG00000119514ENST00000375011ENST00000470473ENST00000610463ENST00000615204ENSG00000165138ENST00000353234ENST00000375019ENST00000444472ENST00000466120ENST00000471846ENST00000486778CIL_000201_0002ENSMUSG00000039774ENSMUST00000045041ENSMUST00000107744ENSMUSG00000066191ENSMUST00000084616ENSMUST00000107747ENSMUST00000152479ENSMUST00000154664ENSMUSG00000081561ENSMUST00000119580ENSMUSG00000084199ENSMUST00000121431ENSMUSG00000094286ENSMUST00000179673
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000201_0001ENSG00000119514ENST00000375011ENST00000610463ENST00000615204ENSG00000165138ENST00000353234ENST00000375019ENST00000444472ENST00000471846CIL_000201_0002ENSMUSG00000039774ENSMUST00000045041ENSMUST00000107744ENSMUSG00000066191ENSMUST00000084616ENSMUST00000107747ENSMUST00000152479ENSMUST00000154664ENSMUSG00000081561ENSMUST00000119580ENSMUSG00000084199ENSMUST00000121431ENSMUSG00000094286ENSMUST00000179673
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119514 ENST00000375011 0.910±0.00 0.653±0.00 0.157±0.00 0.398±0.09 0.697±0.22 6.141±2.32 0.065±0.00 0.652±0.61 0.761±0.75 1.646±0.25 0.028±0.00 1.211±0.70 0.799±0.16 1.409±0.10
ENST00000470473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610463 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.995±0.00 N/A N/A N/A N/A
ENST00000615204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A
ENSG00000165138 ENST00000353234 1.496±0.00 2.636±0.00 0.408±0.00 0.886±0.00 1.179±0.77 1.158±0.22 0.550±0.00 3.210±0.00 0.557±0.17 1.222±0.00 0.260±0.02 4.190±0.73 1.011±0.45 2.199±0.53
ENST00000375019 N/A N/A N/A 1.181±0.85 1.473±0.00 3.095±0.00 N/A N/A N/A 2.024±0.00 0.536±0.00 4.589±0.72 1.043±0.07 2.447±0.00
ENST00000444472 1.361±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.314±0.00 2.691±0.00 7.010±0.00
ENST00000466120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A
ENST00000486778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039774 ENSMUST00000045041 2.345±2.06 1.189±0.35 1.298±0.05 0.403±0.10 2.904±1.02 61.707±6.82 0.350±0.06 1.739±0.12 0.206±0.09 1.703±0.79 0.281±0.23 4.996±2.63 1.305±0.48 1.084±0.49
ENSMUST00000107744 N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A 0.098±0.07 N/A 0.050±0.03 N/A 0.431±0.00 0.479±0.00
ENSMUSG00000066191 ENSMUST00000084616 N/A N/A 0.669±0.07 1.198±0.00 0.346±0.13 0.648±0.00 0.241±0.00 1.255±0.20 0.061±0.03 0.336±0.05 0.223±0.09 0.837±0.50 0.108±0.00 0.294±0.00
ENSMUST00000107747 0.503±0.00 0.368±0.04 0.447±0.02 2.243±0.63 0.517±0.00 N/A 0.290±0.03 1.063±0.23 0.078±0.00 0.391±0.09 0.234±0.07 N/A 0.337±0.06 0.649±0.52
ENSMUST00000152479 N/A N/A N/A N/A 1.135±0.00 N/A N/A N/A N/A N/A N/A N/A 0.509±0.06 N/A
ENSMUST00000154664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A
ENSMUSG00000081561 ENSMUST00000119580 N/A N/A N/A 0.038±0.00 N/A 0.440±0.00 0.165±0.00 0.350±0.00 N/A N/A N/A 0.380±0.00 0.092±0.09 N/A
ENSMUSG00000084199 ENSMUST00000121431 0.278±0.00 N/A 0.113±0.00 N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A 0.226±0.00 N/A N/A
ENSMUSG00000094286 ENSMUST00000179673 0.491±0.28 0.292±0.04 0.753±0.15 0.411±0.29 0.480±0.25 1.122±0.69 0.231±0.13 0.160±0.05 0.242±0.24 0.638±0.49 0.424±0.22 1.382±0.80 0.383±0.25 0.351±0.12

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