C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: latent transforming growth factor beta binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119681 LTBP2 9606 - 14:74498170-74612378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261978 LTBP2-001 74498170-74612331 protein_coding
  ENST00000553939 LTBP2-002 74500411-74612378 nonsense_mediated_decay
  ENST00000554861 LTBP2-006 74500705-74501978 retained_intron
  ENST00000556206 LTBP2-007 74506706-74509807 protein_coding
  ENST00000556690 LTBP2-003 74500732-74612072 protein_coding
  ENST00000557425 LTBP2-005 74535932-74612168 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261978ENST00000553939ENST00000556690
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261978 19.150±0.00 3.599±0.00 0.444±0.00 0.581±0.45 10.888±5.91 4.568±4.03 3.508±3.17 0.652±0.61 3.376±0.00 9.326±2.41 3.459±0.00 12.026±7.21 14.994±7.26 5.655±4.30
ENST00000553939 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.024±0.00 1.524±0.90 13.730±0.00 N/A N/A
ENST00000556690 11.301±0.00 N/A N/A N/A N/A N/A N/A N/A 1.102±0.00 N/A 1.055±0.00 N/A 4.777±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000407 CIL_000407_0001 CGP 14:74493720-74612378

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0006605 TAS protein targeting
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008201 IEA heparin binding
GO:0009306 TAS protein secretion
GO:0019838 IEA growth factor binding
GO:0031012 IDA extracellular matrix
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002020 Ltbp2 latent transforming growth factor beta binding protein 2 protein_coding Mus_musculus

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