C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latent transforming growth factor beta binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261978 LTBP2-001 ENSG00000119681 9606 - 14:74498170-74612331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261978 19.150±0.00 3.599±0.00 0.444±0.00 0.581±0.45 10.888±5.91 4.568±4.03 3.508±3.17 0.652±0.61 3.376±0.00 9.326±2.41 3.459±0.00 12.026±7.21 14.994±7.26 5.655±4.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000407 CIL_000407_0001 CGP 14:74493720-74612378

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0006605 TAS protein targeting
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008201 IEA heparin binding
GO:0009306 TAS protein secretion
GO:0019838 IEA growth factor binding
GO:0031012 IDA extracellular matrix
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002073 Ltbp2-001 protein_coding Mus_musculus 0 4549
ENSMUST00000110254 Ltbp2-201 protein_coding Mus_musculus 0 2854
ENSMUST00000163189 Ltbp2-002 protein_coding Mus_musculus 0 2854
ENSMUST00000168699 Ltbp2-003 retained_intron Mus_musculus 0 1382
ENSMUST00000165141 Ltbp2-005 protein_coding Mus_musculus 0 636
ENSMUST00000166383 Ltbp2-004 protein_coding Mus_musculus 0 580
ENSMUST00000171853 D030025P21Rik-201 protein_coding Mus_musculus 0 243

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