C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000407_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165898-ENSG00000119681 CGP 9606 14:74493720-74612378
GeneTranscriptPositionBiotype
ENSG00000119655 (NPC2)
Niemann-Pick disease, type C2 		ENST00000238633 (NPC2-008) 74479942-74493291 protein_coding
ENST00000434013 (NPC2-003) 74476192-74493307 protein_coding
ENST00000541064 (NPC2-002) 74479223-74493281 protein_coding
ENST00000553490 (NPC2-006) 74480082-74493339 protein_coding
ENST00000554482 (NPC2-009) 74479942-74493242 nonsense_mediated_decay
ENST00000555592 (NPC2-005) 74484411-74493608 protein_coding
ENST00000555619 (NPC2-001) 74479933-74493512 protein_coding
ENST00000556009 (NPC2-004) 74480096-74494177 protein_coding
ENST00000557510 (NPC2-007) 74480187-74493347 protein_coding
ENSG00000119681 (LTBP2)
latent transforming growth factor beta binding protein 2 		ENST00000261978 (LTBP2-001) 74498170-74612331 protein_coding
ENST00000553939 (LTBP2-002) 74500411-74612378 nonsense_mediated_decay
ENST00000554861 (LTBP2-006) 74500705-74501978 retained_intron
ENST00000556206 (LTBP2-007) 74506706-74509807 protein_coding
ENST00000556690 (LTBP2-003) 74500732-74612072 protein_coding
ENST00000557425 (LTBP2-005) 74535932-74612168 processed_transcript
ENSG00000165898 (ISCA2)
iron-sulfur cluster assembly 2 		ENST00000298818 (ISCA2-002) 74493756-74495366 protein_coding
ENST00000554924 (ISCA2-003) 74493765-74495130 protein_coding
ENST00000555139 (ISCA2-004) 74493772-74495022 retained_intron
ENST00000556816 (ISCA2-001) 74493720-74497106 protein_coding
CIL_000407_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021241-ENSMUSG00000002020 CGP 10090 12:84773270-84876532
GeneTranscriptPositionBiotype
ENSMUSG00000002020 (Ltbp2)
latent transforming growth factor beta binding protein 2 		ENSMUST00000002073 (Ltbp2-001) 84783212-84876532 protein_coding
ENSMUST00000110254 (Ltbp2-201) 84783213-84876495 protein_coding
ENSMUST00000163189 (Ltbp2-002) 84783329-84876479 protein_coding
ENSMUST00000163214 (Ltbp2-006) 84786379-84792971 protein_coding
ENSMUST00000165141 (Ltbp2-005) 84791859-84799463 protein_coding
ENSMUST00000166383 (Ltbp2-004) 84785206-84791843 protein_coding
ENSMUST00000168699 (Ltbp2-003) 84807713-84876491 retained_intron
ENSMUSG00000021241 (Isca2)
iron-sulfur cluster assembly 2 homolog (S. cerevisiae) 		ENSMUST00000021667 (Isca2-201) 84773270-84775089 protein_coding
ENSMUSG00000092130 (D030025P21Rik)
RIKEN cDNA D030025P21 gene 		ENSMUST00000171853 (D030025P21Rik-201) 84875769-84878132 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000407_0001ENSG00000119655ENST00000238633ENST00000434013ENST00000541064ENST00000553490ENST00000554482ENST00000555592ENST00000555619ENST00000556009ENST00000557510ENSG00000119681ENST00000261978ENST00000553939ENST00000554861ENST00000556206ENST00000556690ENST00000557425ENSG00000165898ENST00000298818ENST00000554924ENST00000555139ENST00000556816CIL_000407_0002ENSMUSG00000002020ENSMUST00000002073ENSMUST00000110254ENSMUST00000163189ENSMUST00000163214ENSMUST00000165141ENSMUST00000166383ENSMUST00000168699ENSMUSG00000021241ENSMUST00000021667ENSMUSG00000092130ENSMUST00000171853
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000407_0001ENSG00000119655ENST00000238633ENST00000553490ENST00000554482ENST00000555592ENST00000555619ENST00000556009ENSG00000119681ENST00000261978ENST00000553939ENST00000556690ENSG00000165898ENST00000298818ENST00000556816CIL_000407_0002ENSMUSG00000002020ENSMUST00000002073ENSMUST00000110254ENSMUST00000163189ENSMUST00000163214ENSMUST00000166383ENSMUST00000168699ENSMUSG00000021241ENSMUST00000021667ENSMUSG00000092130ENSMUST00000171853
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119655 ENST00000238633 70.637±0.00 56.410±0.00 4.131±0.00 10.351±3.80 24.103±16.20 24.569±0.00 13.376±10.15 54.915±0.00 19.934±8.36 92.792±62.76 8.863±0.00 33.330±21.28 72.671±34.87 70.138±14.85
ENST00000434013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553490 N/A N/A N/A N/A N/A N/A N/A N/A 19.283±0.00 N/A N/A N/A N/A N/A
ENST00000554482 N/A 47.164±0.00 N/A 19.771±0.00 53.446±0.00 N/A 1.686±0.00 4.324±0.00 N/A N/A N/A N/A N/A 70.757±0.00
ENST00000555592 N/A N/A 5.696±0.00 N/A 13.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555619 66.870±0.00 41.299±0.00 N/A 21.290±0.00 6.501±0.00 24.978±16.66 7.096±6.25 23.540±15.85 8.763±0.00 15.255±0.00 6.325±4.60 110.447±84.95 169.573±13.30 75.716±0.28
ENST00000556009 53.223±0.00 45.505±0.00 N/A 21.286±0.00 N/A 51.926±0.00 20.163±0.00 75.831±0.00 28.226±0.00 165.819±0.00 18.366±0.00 N/A N/A 134.210±0.00
ENST00000557510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119681 ENST00000261978 19.150±0.00 3.599±0.00 0.444±0.00 0.581±0.45 10.888±5.91 4.568±4.03 3.508±3.17 0.652±0.61 3.376±0.00 9.326±2.41 3.459±0.00 12.026±7.21 14.994±7.26 5.655±4.30
ENST00000553939 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.024±0.00 1.524±0.90 13.730±0.00 N/A N/A
ENST00000554861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556690 11.301±0.00 N/A N/A N/A N/A N/A N/A N/A 1.102±0.00 N/A 1.055±0.00 N/A 4.777±0.00 N/A
ENST00000557425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165898 ENST00000298818 N/A N/A N/A N/A N/A N/A 12.741±0.00 N/A N/A N/A 4.722±3.14 N/A N/A N/A
ENST00000554924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556816 N/A N/A 1.200±0.00 2.050±0.00 1.112±0.00 1.563±0.00 0.629±0.00 N/A N/A N/A 0.580±0.00 0.459±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002020 ENSMUST00000002073 2.004±0.00 N/A 0.343±0.05 0.043±0.01 6.455±2.87 0.399±0.12 0.651±0.28 0.373±0.21 0.163±0.07 18.546±3.48 0.078±0.06 4.136±1.13 0.718±0.53 1.074±0.15
ENSMUST00000110254 0.826±0.00 N/A N/A N/A N/A 0.479±0.00 N/A N/A N/A N/A 0.033±0.02 N/A 0.336±0.00 0.276±0.00
ENSMUST00000163189 N/A 0.411±0.00 0.139±0.00 0.205±0.00 N/A 0.221±0.00 N/A N/A 0.081±0.04 5.545±0.59 0.164±0.13 3.260±2.18 0.709±0.00 0.349±0.00
ENSMUST00000163214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.07 N/A N/A N/A
ENSMUST00000165141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166383 N/A 4.940±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168699 1.492±0.00 0.537±0.14 0.120±0.00 0.090±0.00 5.704±0.57 N/A 0.758±0.11 0.298±0.05 N/A N/A 0.033±0.01 N/A N/A N/A
ENSMUSG00000021241 ENSMUST00000021667 19.793±13.71 19.756±1.72 23.977±3.75 16.222±10.03 17.821±9.40 6.396±0.91 26.221±2.34 17.095±4.27 24.743±11.38 7.493±0.81 13.462±1.51 8.774±4.55 12.247±6.71 33.092±14.61
ENSMUSG00000092130 ENSMUST00000171853 N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A 0.069±0.00 N/A N/A 3.238±0.66 0.443±0.20 N/A

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