C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 98, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119812 FAM98A 9606 - 2:33583658-33599382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000238823 FAM98A-001 33583658-33599362 protein_coding
  ENST00000403368 FAM98A-004 33583670-33599291 protein_coding
  ENST00000431950 FAM98A-009 33595487-33599277 protein_coding
  ENST00000464415 FAM98A-006 33591923-33599382 retained_intron
  ENST00000474985 FAM98A-002 33583662-33589848 retained_intron
  ENST00000475122 FAM98A-010 33584889-33586869 retained_intron
  ENST00000492649 FAM98A-011 33585614-33587641 retained_intron
  ENST00000498340 FAM98A-007 33586671-33599284 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000238823ENST00000403368ENST00000464415ENST00000474985ENST00000498340
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000238823 12.438±0.00 7.421±0.00 1.744±0.00 9.511±6.30 10.189±7.73 6.851±4.90 7.164±6.30 9.442±6.84 5.181±2.09 6.408±0.00 9.507±6.67 8.960±5.70 13.942±0.56 32.868±2.87
ENST00000403368 N/A N/A N/A N/A N/A N/A 1.152±0.00 N/A N/A 2.008±0.00 N/A 0.737±0.00 N/A N/A
ENST00000464415 N/A N/A 5.050±0.00 4.014±0.00 N/A 5.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474985 N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498340 N/A N/A N/A N/A 5.377±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TB CIL_0003TB_0002 CGP 2:33436324-33599382
CIL_0000N0 CIL_0000N0_0001 CGP 2:33583658-36551135

Gene Ontology
GO IDEvidence TypeGO Description
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078391 fam98a family with sequence similarity 98, member A protein_coding Danio_rerio
ENSMUSG00000002017 Fam98a family with sequence similarity 98, member A protein_coding Mus_musculus

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