C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000N0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119812-ENSG00000150938 CGP 9606 2:33583658-36551135
GeneTranscriptPositionBiotype
ENSG00000119812 (FAM98A)
family with sequence similarity 98, member A 		ENST00000238823 (FAM98A-001) 33583658-33599362 protein_coding
ENST00000403368 (FAM98A-004) 33583670-33599291 protein_coding
ENST00000431950 (FAM98A-009) 33595487-33599277 protein_coding
ENST00000464415 (FAM98A-006) 33591923-33599382 retained_intron
ENST00000474985 (FAM98A-002) 33583662-33589848 retained_intron
ENST00000475122 (FAM98A-010) 33584889-33586869 retained_intron
ENST00000492649 (FAM98A-011) 33585614-33587641 retained_intron
ENST00000498340 (FAM98A-007) 33586671-33599284 processed_transcript
ENSG00000150938 (CRIM1)
cysteine rich transmembrane BMP regulator 1 (chordin-like) 		ENST00000280527 (CRIM1-001) 36355926-36551135 protein_coding
ENST00000413985 (CRIM1-008) 36513690-36529512 protein_coding
ENST00000426856 (CRIM1-006) 36356443-36464655 protein_coding
ENST00000428774 (CRIM1-002) 36356471-36378903 protein_coding
ENST00000473403 (CRIM1-005) 36369115-36379224 processed_transcript
ENST00000477491 (CRIM1-003) 36378357-36379213 processed_transcript
ENST00000481321 (CRIM1-007) 36479543-36499412 retained_intron
ENST00000497236 (CRIM1-004) 36378357-36379213 processed_transcript
ENSG00000187999 (HNRNPA1P61)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 61 		ENST00000342073 (HNRNPA1P61-001) 33636502-33637425 processed_pseudogene
ENSG00000203386 (LINC01317)
long intergenic non-protein coding RNA 1317 		ENST00000366209 (LINC01317-002) 33706886-34297753 lincRNA
ENST00000442026 (LINC01317-001) 33706908-34061047 lincRNA
ENSG00000226785 (AC073218.1)
 ENST00000422558 (AC073218.1-001) 34383788-34635340 lincRNA
ENSG00000228262 (LINC01320)
long intergenic non-protein coding RNA 1320 		ENST00000423663 (LINC01320-001) 34677579-34722563 lincRNA
ENST00000453774 (LINC01320-002) 34713590-34738231 lincRNA
ENST00000587085 (LINC01320-003) 34735078-34737571 lincRNA
ENST00000603129 (LINC01320-005) 34713590-34737577 lincRNA
ENST00000604250 (LINC01320-004) 34710452-34722513 lincRNA
ENST00000607437 (LINC01320-006) 34704711-34722119 lincRNA
ENST00000616475 (LINC01320-007) 34713578-34737442 lincRNA
ENST00000621006 (LINC01320-008) 34731715-34737442 lincRNA
ENSG00000233752 (AC009414.1)
 ENST00000427200 (AC009414.1-001) 36299388-36299830 processed_pseudogene
ENSG00000234587 (MRPL50P1)
mitochondrial ribosomal protein L50 pseudogene 1 		ENST00000431951 (MRPL50P1-001) 35724759-35725142 processed_pseudogene
ENSG00000235064 (SLC25A5P2)
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 pseudogene 2 		ENST00000413713 (SLC25A5P2-001) 33839782-33840678 processed_pseudogene
ENSG00000237320 (AC019064.1)
 ENST00000414796 (AC019064.1-001) 34998273-35000160 lincRNA
ENSG00000237790 (LINC01318)
long intergenic non-protein coding RNA 1318 		ENST00000423593 (LINC01318-001) 34067226-34069550 lincRNA
ENSG00000238038 (ATP6V0E1P3)
ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 pseudogene 3 		ENST00000420036 (ATP6V0E1P3-001) 33602041-33602286 processed_pseudogene
ENSG00000239649 (MYADML)
myeloid-associated differentiation marker-like (pseudogene) 		ENST00000474610 (MYADML-001) 33726061-33728207 processed_transcript
ENST00000490394 (MYADML-003) 33722721-33727564 processed_transcript
ENST00000491596 (MYADML-002) 33727038-33727988 transcribed_processed_pseudogene
ENSG00000260025 (RP11-490M8.1)
 ENST00000565283 (RP11-490M8.1-001) 36354749-36355114 lincRNA
ENSG00000264352 (RN7SL602P)
RNA, 7SL, cytoplasmic 602, pseudogene 		ENST00000578326 (RN7SL602P-201) 34809233-34809556 misc_RNA
ENSG00000266861 (AC097506.1)
 ENST00000581297 (AC097506.1-201) 33927384-33927472 miRNA
ENSG00000272027 (RP11-529E15.1)
 ENST00000605962 (RP11-529E15.1-001) 34700359-34703606 lincRNA
ENST00000606468 (RP11-529E15.1-002) 34692290-34694298 lincRNA
CIL_0000N0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002017-ENSMUSG00000024074 CGP 10090 17:75537086-78376592
GeneTranscriptPositionBiotype
ENSMUSG00000002017 (Fam98a)
family with sequence similarity 98, member A 		ENSMUST00000112507 (Fam98a-001) 75537086-75551946 protein_coding
ENSMUST00000140729 (Fam98a-003) 75539031-75540572 retained_intron
ENSMUST00000141969 (Fam98a-002) 75544467-75551796 retained_intron
ENSMUSG00000024074 (Crim1)
cysteine rich transmembrane BMP regulator 1 (chordin like) 		ENSMUST00000112498 (Crim1-201) 78200248-78376592 protein_coding
ENSMUSG00000066958 (Gm16391)
predicted pseudogene 16391 		ENSMUST00000086601 (Gm16391-001) 76284415-76284861 processed_pseudogene
ENSMUSG00000091058 (Gm17538)
predicted gene, 17538 		ENSMUST00000168236 (Gm17538-201) 77674376-77674702 processed_pseudogene
ENSMUSG00000092979 (Gm25069)
predicted gene, 25069 		ENSMUST00000175238 (Gm25069-201) 78302661-78302746 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000N0_0001ENSG00000119812ENST00000238823ENST00000403368ENST00000464415ENST00000474985ENST00000498340ENSG00000150938ENST00000280527ENSG00000187999ENST00000342073ENSG00000203386ENST00000366209ENST00000442026ENSG00000226785ENST00000422558ENSG00000228262ENST00000423663ENST00000453774ENST00000587085ENST00000604250ENST00000607437ENST00000616475ENSG00000233752ENST00000427200ENSG00000234587ENST00000431951ENSG00000235064ENST00000413713ENSG00000237320ENST00000414796ENSG00000237790ENST00000423593ENSG00000238038ENST00000420036ENSG00000239649ENST00000474610ENST00000491596ENSG00000260025ENST00000565283ENSG00000264352ENST00000578326ENSG00000266861ENST00000581297ENSG00000272027ENST00000605962ENST00000606468CIL_0000N0_0002ENSMUSG00000002017ENSMUST00000112507ENSMUSG00000024074ENSMUST00000112498ENSMUSG00000066958ENSMUST00000086601ENSMUSG00000091058ENSMUST00000168236ENSMUSG00000092979ENSMUST00000175238
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119812 ENST00000238823 12.438±0.00 7.421±0.00 1.744±0.00 9.511±6.30 10.189±7.73 6.851±4.90 7.164±6.30 9.442±6.84 5.181±2.09 6.408±0.00 9.507±6.67 8.960±5.70 13.942±0.56 32.868±2.87
ENST00000403368 N/A N/A N/A N/A N/A N/A 1.152±0.00 N/A N/A 2.008±0.00 N/A 0.737±0.00 N/A N/A
ENST00000431950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464415 N/A N/A 5.050±0.00 4.014±0.00 N/A 5.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474985 N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498340 N/A N/A N/A N/A 5.377±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150938 ENST00000280527 84.361±0.00 9.351±0.00 15.411±0.00 12.154±4.51 35.584±15.72 10.856±0.33 8.326±4.33 21.374±17.92 9.565±7.12 35.165±18.29 18.468±16.32 11.985±0.97 59.720±8.92 5.406±0.22
ENST00000413985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187999 ENST00000342073 N/A 0.028±0.00 N/A 0.082±0.05 N/A N/A N/A 0.140±0.00 0.079±0.00 N/A 0.162±0.15 0.171±0.15 N/A 0.094±0.07
ENSG00000203386 ENST00000366209 0.278±0.00 0.434±0.00 0.380±0.00 0.119±0.00 0.022±0.00 0.102±0.00 0.024±0.00 0.529±0.00 0.019±0.00 0.121±0.00 N/A 0.045±0.00 0.075±0.00 0.722±0.00
ENST00000442026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00
ENSG00000226785 ENST00000422558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00
ENSG00000228262 ENST00000423663 N/A 0.120±0.00 6.431±0.00 N/A N/A N/A 0.066±0.02 N/A N/A N/A N/A 1.315±0.00 0.258±0.30 0.215±0.00
ENST00000453774 N/A N/A N/A N/A N/A N/A N/A 40.860±0.00 0.148±0.00 N/A N/A 0.049±0.00 0.033±0.00 0.363±0.00
ENST00000587085 N/A N/A 19.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604250 N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 0.412±0.00 0.297±0.00
ENST00000607437 0.029±0.00 0.203±0.00 N/A 0.267±0.00 N/A 0.132±0.00 0.080±0.00 N/A N/A 0.026±0.00 N/A N/A N/A N/A
ENST00000616475 N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000621006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233752 ENST00000427200 0.055±0.00 0.113±0.00 N/A 0.169±0.00 0.055±0.00 0.155±0.00 0.027±0.00 0.222±0.00 0.051±0.00 0.132±0.00 0.102±0.00 N/A N/A 0.051±0.00
ENSG00000234587 ENST00000431951 N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A 0.759±0.00 N/A N/A N/A N/A
ENSG00000235064 ENST00000413713 0.018±0.00 0.019±0.00 N/A 0.021±0.00 N/A N/A N/A 0.077±0.00 0.017±0.00 0.053±0.00 N/A N/A N/A 0.017±0.00
ENSG00000237320 ENST00000414796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.06
ENSG00000237790 ENST00000423593 N/A N/A N/A 0.017±0.00 N/A N/A N/A 0.033±0.00 N/A 0.075±0.00 N/A N/A N/A 0.038±0.01
ENSG00000238038 ENST00000420036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00
ENSG00000239649 ENST00000474610 0.058±0.00 0.097±0.00 N/A N/A 0.020±0.00 0.193±0.00 0.009±0.00 N/A N/A N/A N/A N/A N/A 6.331±0.00
ENST00000490394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491596 N/A 0.069±0.00 N/A N/A N/A N/A 0.578±0.00 N/A N/A N/A N/A N/A N/A 6.992±0.00
ENSG00000260025 ENST00000565283 3.407±0.00 7.002±0.00 0.246±0.00 11.672±0.00 3.523±3.17 1.286±0.43 1.033±0.00 2.116±0.00 0.723±0.49 2.067±1.13 1.952±0.00 2.290±1.02 3.089±1.30 2.280±0.82
ENSG00000264352 ENST00000578326 0.366±0.00 0.780±0.00 0.432±0.00 0.619±0.00 0.355±0.29 0.138±0.00 0.051±0.00 0.210±0.00 0.452±0.13 0.423±0.19 0.048±0.00 0.274±0.03 N/A 0.698±0.03
ENSG00000266861 ENST00000581297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00
ENSG00000272027 ENST00000605962 0.044±0.00 0.113±0.00 N/A 0.093±0.00 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A 0.339±0.24
ENST00000606468 0.311±0.00 1.157±0.00 N/A 0.424±0.00 1.514±0.00 0.304±0.00 0.233±0.00 N/A 0.487±0.00 0.511±0.00 0.055±0.00 0.428±0.00 N/A 0.647±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002017 ENSMUST00000112507 9.206±1.20 2.483±0.22 15.315±0.10 9.630±2.94 3.209±1.34 4.705±1.60 8.164±0.55 6.815±1.18 9.067±4.32 5.138±1.00 11.153±1.18 8.581±4.69 14.434±2.86 34.496±6.29
ENSMUST00000140729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024074 ENSMUST00000112498 11.594±3.24 6.684±1.18 11.746±3.16 5.570±2.85 6.896±1.50 10.208±0.96 4.110±0.69 16.707±1.56 1.192±0.44 31.429±2.83 4.699±0.62 23.552±5.80 14.665±8.56 0.590±0.26
ENSMUSG00000066958 ENSMUST00000086601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A
ENSMUSG00000091058 ENSMUST00000168236 2.228±1.03 1.126±0.85 0.953±0.54 1.035±0.36 0.755±0.51 1.378±0.67 1.758±0.69 2.041±0.64 1.440±1.14 1.183±0.47 0.271±0.02 2.454±1.31 0.341±0.20 0.586±0.29
ENSMUSG00000092979 ENSMUST00000175238 N/A N/A N/A N/A N/A N/A N/A 17549.801±0.00 N/A N/A N/A N/A N/A N/A

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