C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin beta 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120327 PCDHB14 9606 + 5:141222932-141227759 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000239449 PCDHB14-001 141222932-141227759 protein_coding
  ENST00000624896 PCDHB14-003 141223359-141226093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000239449ENST00000624896
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000239449 0.869±0.00 0.887±0.00 1.706±0.00 1.135±0.25 0.948±0.14 0.655±0.28 0.075±0.00 0.758±0.69 1.084±0.00 N/A 0.750±0.35 0.359±0.06
ENST00000624896 N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A 0.388±0.00 1.978±0.99 0.883±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062S CIL_00062S_000E CGP 5:141213919-141227759

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010684 CU915772.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000071889 pcdh2g8 protocadherin 2 gamma 8 protein_coding Danio_rerio
ENSDARG00000071891 pcdh2g6 protocadherin 2 gamma 6 protein_coding Danio_rerio
ENSDARG00000071892 CU915772.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000074738 pcdh2g9 protocadherin 2 gamma 9 protein_coding Danio_rerio
ENSDARG00000077343 CT573264.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000077867 CT573264.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000079937 pcdh2g5 protocadherin 2 gamma 5 protein_coding Danio_rerio
ENSMUSG00000046191 Pcdhb20 protocadherin beta 20 protein_coding Mus_musculus

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