C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120805 ARL1 9606 - 12:101393120-101407820 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261636 ARL1-001 101393120-101407820 protein_coding
  ENST00000536227 ARL1-005 101394944-101407461 protein_coding
  ENST00000539055 ARL1-004 101394918-101407746 protein_coding
  ENST00000548070 ARL1-010 101405884-101407502 protein_coding
  ENST00000549283 ARL1-009 101396540-101407746 processed_transcript
  ENST00000549302 ARL1-006 101403416-101407756 processed_transcript
  ENST00000550597 ARL1-012 101395507-101401486 retained_intron
  ENST00000551092 ARL1-013 101396414-101407762 nonsense_mediated_decay
  ENST00000551671 ARL1-007 101396143-101407753 protein_coding
  ENST00000551688 ARL1-008 101395488-101407749 protein_coding
  ENST00000551828 ARL1-011 101395592-101407463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261636ENST00000536227ENST00000539055ENST00000549283ENST00000551828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261636 11.324±0.00 9.612±0.00 4.003±0.00 14.962±4.65 10.727±2.68 9.712±8.12 9.276±4.81 11.448±8.44 9.373±0.09 8.957±3.86 5.392±2.01 14.574±6.47 12.176±1.32 12.934±5.46
ENST00000536227 N/A N/A N/A N/A 2.800±0.00 N/A N/A N/A 6.209±0.00 N/A N/A 7.310±0.00 N/A N/A
ENST00000539055 N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A 6.659±0.00 N/A
ENST00000549283 N/A N/A 4.883±0.00 9.871±0.00 11.362±0.00 9.240±0.00 9.282±0.00 6.241±0.00 11.786±0.00 14.261±0.00 4.183±0.00 18.922±10.45 32.491±0.00 29.641±0.00
ENST00000551828 N/A N/A N/A 20.392±0.00 N/A N/A N/A 28.282±0.00 N/A N/A N/A 12.167±0.00 11.938±0.00 14.228±7.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I9 CIL_0007I9_0002 CGP 12:101280109-101407820

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA:IDA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 ISS:IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0006184 IDA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007030 ISS Golgi organization
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008047 IDA enzyme activator activity
GO:0009404 IDA toxin metabolic process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019904 IPI protein domain specific binding
GO:0031584 IDA activation of phospholipase D activity
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0034067 IMP protein localization to Golgi apparatus
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0046872 IEA metal ion binding
GO:0048193 IEA Golgi vesicle transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014310 arl1 ADP-ribosylation factor-like 1 protein_coding Danio_rerio
ENSMUSG00000060904 Arl1 ADP-ribosylation factor-like 1 protein_coding Mus_musculus

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