C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261636 ARL1-001 ENSG00000120805 9606 - 12:101393120-101407820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261636
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261636 11.324±0.00 9.612±0.00 4.003±0.00 14.962±4.65 10.727±2.68 9.712±8.12 9.276±4.81 11.448±8.44 9.373±0.09 8.957±3.86 5.392±2.01 14.574±6.47 12.176±1.32 12.934±5.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I9 CIL_0007I9_0002 CGP 12:101280109-101407820

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA:IDA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 ISS:IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0006184 IDA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007030 ISS Golgi organization
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008047 IDA enzyme activator activity
GO:0009404 IDA toxin metabolic process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019904 IPI protein domain specific binding
GO:0031584 IDA activation of phospholipase D activity
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0034067 IMP protein localization to Golgi apparatus
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0046872 IEA metal ion binding
GO:0048193 IEA Golgi vesicle transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116234 Arl1-001 protein_coding Mus_musculus 0 972
ENSMUST00000080379 Arl1-003 protein_coding Mus_musculus 0 647
ENSMUST00000170137 Arl1-002 protein_coding Mus_musculus 0 235

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