C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pyridine nucleotide-disulphide oxidoreductase domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121350 PYROXD1 9606 + 12:21437615-21471252 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000240651 PYROXD1-001 21437677-21471252 protein_coding
  ENST00000375266 PYROXD1-004 21437645-21468920 nonsense_mediated_decay
  ENST00000536851 PYROXD1-008 21460903-21467589 retained_intron
  ENST00000538072 PYROXD1-007 21454782-21456062 retained_intron
  ENST00000538582 PYROXD1-005 21437915-21470350 protein_coding
  ENST00000538615 PYROXD1-010 21467290-21468826 retained_intron
  ENST00000543476 PYROXD1-009 21437615-21462746 nonsense_mediated_decay
  ENST00000544187 PYROXD1-006 21455242-21461061 nonsense_mediated_decay
  ENST00000544970 PYROXD1-003 21437705-21468770 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000240651ENST00000375266ENST00000543476
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000240651 1.651±0.00 N/A 0.960±0.00 1.451±0.00 1.202±0.00 1.355±0.00 1.827±0.56 1.115±0.04 0.822±0.00 1.243±0.25 2.193±0.67 0.764±0.07 1.150±0.06
ENST00000375266 N/A 1.257±0.00 2.407±0.00 3.599±0.00 3.314±0.00 2.023±0.00 2.215±0.00 3.390±0.00 3.727±0.00 N/A 5.890±0.00 N/A 4.858±0.08
ENST00000543476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.956±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XQ CIL_0006XQ_0002 CGP 12:21354959-21471252
CIL_0005PY CIL_0005PY_0001 CGP 12:21437615-21501669

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033586 ryroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 protein_coding Danio_rerio
ENSMUSG00000041671 Pyroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 protein_coding Mus_musculus

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