C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121350-ENSG00000004700 CGP 9606 12:21437615-21501669
GeneTranscriptPositionBiotype
ENSG00000121350 (PYROXD1)
pyridine nucleotide-disulphide oxidoreductase domain 1 		ENST00000240651 (PYROXD1-001) 21437677-21471252 protein_coding
ENST00000375266 (PYROXD1-004) 21437645-21468920 nonsense_mediated_decay
ENST00000536851 (PYROXD1-008) 21460903-21467589 retained_intron
ENST00000538072 (PYROXD1-007) 21454782-21456062 retained_intron
ENST00000538582 (PYROXD1-005) 21437915-21470350 protein_coding
ENST00000538615 (PYROXD1-010) 21467290-21468826 retained_intron
ENST00000543476 (PYROXD1-009) 21437615-21462746 nonsense_mediated_decay
ENST00000544187 (PYROXD1-006) 21455242-21461061 nonsense_mediated_decay
ENST00000544970 (PYROXD1-003) 21437705-21468770 nonsense_mediated_decay
ENSG00000256021 (TCEB1P31)
transcription elongation factor B (SIII), polypeptide 1 pseudogene 31 		ENST00000540463 (TCEB1P31-001) 21447545-21448314 processed_pseudogene
CIL_0005PY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041671-ENSMUSG00000030243 CGP 10090 6:142345654-142387087
GeneTranscriptPositionBiotype
ENSMUSG00000030243 (Recql)
RecQ protein-like 		ENSMUST00000032370 (Recql-011) 142350342-142387036 protein_coding
ENSMUST00000100832 (Recql-002) 142356947-142387074 protein_coding
ENSMUST00000111803 (Recql-001) 142361376-142387087 protein_coding
ENSMUST00000123912 (Recql-008) 142362121-142363574 protein_coding
ENSMUST00000128082 (Recql-004) 142376919-142387082 protein_coding
ENSMUST00000129694 (Recql-009) 142374820-142386974 protein_coding
ENSMUST00000138578 (Recql-006) 142357860-142363662 processed_transcript
ENSMUST00000141504 (Recql-003) 142356951-142366789 protein_coding
ENSMUST00000143102 (Recql-010) 142367319-142367730 retained_intron
ENSMUST00000154870 (Recql-007) 142362758-142364217 retained_intron
ENSMUST00000155149 (Recql-005) 142364621-142368564 processed_transcript
ENSMUSG00000041671 (Pyroxd1)
pyridine nucleotide-disulphide oxidoreductase domain 1 		ENSMUST00000041852 (Pyroxd1-001) 142345654-142363257 protein_coding
ENSMUST00000123289 (Pyroxd1-003) 142346936-142357520 processed_transcript
ENSMUST00000137098 (Pyroxd1-002) 142345678-142362051 retained_intron
ENSMUST00000153912 (Pyroxd1-004) 142352940-142354691 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PY_0001ENSG00000121350ENST00000240651ENST00000375266ENST00000536851ENST00000538072ENST00000538582ENST00000538615ENST00000543476ENST00000544187ENST00000544970ENSG00000256021ENST00000540463CIL_0005PY_0002ENSMUSG00000030243ENSMUST00000032370ENSMUST00000100832ENSMUST00000111803ENSMUST00000123912ENSMUST00000128082ENSMUST00000129694ENSMUST00000138578ENSMUST00000141504ENSMUST00000143102ENSMUST00000154870ENSMUST00000155149ENSMUSG00000041671ENSMUST00000041852ENSMUST00000123289ENSMUST00000137098ENSMUST00000153912
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PY_0001ENSG00000121350ENST00000240651ENST00000375266ENST00000543476ENSG00000256021ENST00000540463CIL_0005PY_0002ENSMUSG00000030243ENSMUST00000032370ENSMUST00000111803ENSMUST00000128082ENSMUST00000141504ENSMUST00000154870ENSMUST00000155149ENSMUSG00000041671ENSMUST00000041852ENSMUST00000123289
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121350 ENST00000240651 N/A 1.651±0.00 N/A 0.960±0.00 1.451±0.00 1.202±0.00 1.355±0.00 1.827±0.56 1.115±0.04 0.822±0.00 1.243±0.25 2.193±0.67 0.764±0.07 1.150±0.06
ENST00000375266 N/A N/A 1.257±0.00 2.407±0.00 3.599±0.00 3.314±0.00 2.023±0.00 2.215±0.00 3.390±0.00 3.727±0.00 N/A 5.890±0.00 N/A 4.858±0.08
ENST00000536851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.956±0.00
ENST00000544187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256021 ENST00000540463 0.026±0.00 N/A 0.383±0.00 0.081±0.00 0.026±0.00 0.462±0.00 0.024±0.00 0.186±0.00 N/A 0.523±0.00 0.023±0.00 0.456±0.36 N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030243 ENSMUST00000032370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.027±0.00 7.670±3.61
ENSMUST00000100832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111803 2.178±0.66 1.126±0.23 4.646±0.35 4.911±1.78 1.519±0.21 1.593±0.11 0.895±0.31 1.433±0.55 4.441±4.11 3.425±0.20 1.689±0.35 2.000±1.07 4.985±1.62 3.840±1.07
ENSMUST00000123912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.693±14.19 N/A
ENSMUST00000129694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141504 0.993±0.16 0.935±0.16 N/A 2.002±0.10 1.444±0.53 1.651±0.14 0.434±0.04 0.691±0.11 0.556±0.26 1.395±0.17 0.439±0.03 1.271±0.28 2.013±0.56 N/A
ENSMUST00000143102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.045±0.00 N/A N/A
ENSMUST00000155149 N/A N/A N/A 14.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 29.082±13.05 57.625±0.00
ENSMUSG00000041671 ENSMUST00000041852 1.809±0.29 4.361±0.41 2.718±0.48 2.709±0.17 1.477±0.49 4.037±0.76 1.127±0.18 2.308±0.22 1.762±0.27 2.531±0.31 1.037±0.24 2.662±0.69 2.368±0.29 2.436±0.24
ENSMUST00000123289 N/A N/A N/A 7.383±0.00 N/A N/A N/A N/A N/A N/A 3.028±0.40 11.115±4.19 10.584±0.00 N/A
ENSMUST00000137098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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