C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074122-ENSDARG00000033586 CGP 7955 5:62661681-62721098
GeneTranscriptPositionBiotype
ENSDARG00000033586 (ryroxd1)
pyridine nucleotide-disulphide oxidoreductase domain 1 		ENSDART00000042663 (ryroxd1-201) 62705617-62721098 protein_coding
ENSDARG00000074122 (IAPP)
islet amyloid polypeptide 		ENSDART00000111930 (IAPP-201) 62661681-62676468 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006XQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121351-ENSG00000121350 CGP 9606 12:21354959-21471252
GeneTranscriptPositionBiotype
ENSG00000084453 (SLCO1A2)
solute carrier organic anion transporter family, member 1A2 		ENST00000307378 (SLCO1A2-001) 21264600-21395437 protein_coding
ENST00000413682 (SLCO1A2-008) 21304523-21418016 protein_coding
ENST00000416627 (SLCO1A2-015) 21334609-21395397 protein_coding
ENST00000421287 (SLCO1A2-013) 21318831-21395397 protein_coding
ENST00000421294 (SLCO1A2-011) 21314585-21334913 protein_coding
ENST00000422327 (SLCO1A2-012) 21306882-21334907 protein_coding
ENST00000430803 (SLCO1A2-014) 21334643-21395397 protein_coding
ENST00000435179 (SLCO1A2-007) 21314620-21419584 protein_coding
ENST00000445053 (SLCO1A2-005) 21314664-21334895 protein_coding
ENST00000450590 (SLCO1A2-010) 21314611-21403657 protein_coding
ENST00000453443 (SLCO1A2-009) 21306914-21403663 protein_coding
ENST00000458504 (SLCO1A2-002) 21269414-21334900 protein_coding
ENST00000463718 (SLCO1A2-003) 21274903-21324736 retained_intron
ENST00000473830 (SLCO1A2-006) 21311627-21419594 processed_transcript
ENST00000480394 (SLCO1A2-004) 21273942-21324681 retained_intron
ENST00000544020 (SLCO1A2-016) 21269338-21334671 nonsense_mediated_decay
ENST00000544290 (SLCO1A2-017) 21269459-21395261 nonsense_mediated_decay
ENSG00000121350 (PYROXD1)
pyridine nucleotide-disulphide oxidoreductase domain 1 		ENST00000240651 (PYROXD1-001) 21437677-21471252 protein_coding
ENST00000375266 (PYROXD1-004) 21437645-21468920 nonsense_mediated_decay
ENST00000536851 (PYROXD1-008) 21460903-21467589 retained_intron
ENST00000538072 (PYROXD1-007) 21454782-21456062 retained_intron
ENST00000538582 (PYROXD1-005) 21437915-21470350 protein_coding
ENST00000538615 (PYROXD1-010) 21467290-21468826 retained_intron
ENST00000543476 (PYROXD1-009) 21437615-21462746 nonsense_mediated_decay
ENST00000544187 (PYROXD1-006) 21455242-21461061 nonsense_mediated_decay
ENST00000544970 (PYROXD1-003) 21437705-21468770 nonsense_mediated_decay
ENSG00000121351 (IAPP)
islet amyloid polypeptide 		ENST00000240652 (IAPP-001) 21372884-21379978 protein_coding
ENST00000535428 (IAPP-004) 21373407-21378629 protein_coding
ENST00000537593 (IAPP-003) 21372928-21378395 protein_coding
ENST00000539393 (IAPP-005) 21354959-21378495 protein_coding
ENST00000542023 (IAPP-002) 21372919-21379978 protein_coding
ENSG00000256021 (TCEB1P31)
transcription elongation factor B (SIII), polypeptide 1 pseudogene 31 		ENST00000540463 (TCEB1P31-001) 21447545-21448314 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006XQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041681-ENSMUSG00000041671 CGP 10090 6:142298423-142363257
GeneTranscriptPositionBiotype
ENSMUSG00000030243 (Recql)
RecQ protein-like 		ENSMUST00000032370 (Recql-011) 142350342-142387036 protein_coding
ENSMUST00000100832 (Recql-002) 142356947-142387074 protein_coding
ENSMUST00000111803 (Recql-001) 142361376-142387087 protein_coding
ENSMUST00000123912 (Recql-008) 142362121-142363574 protein_coding
ENSMUST00000128082 (Recql-004) 142376919-142387082 protein_coding
ENSMUST00000129694 (Recql-009) 142374820-142386974 protein_coding
ENSMUST00000138578 (Recql-006) 142357860-142363662 processed_transcript
ENSMUST00000141504 (Recql-003) 142356951-142366789 protein_coding
ENSMUST00000143102 (Recql-010) 142367319-142367730 retained_intron
ENSMUST00000154870 (Recql-007) 142362758-142364217 retained_intron
ENSMUST00000155149 (Recql-005) 142364621-142368564 processed_transcript
ENSMUSG00000041671 (Pyroxd1)
pyridine nucleotide-disulphide oxidoreductase domain 1 		ENSMUST00000041852 (Pyroxd1-001) 142345654-142363257 protein_coding
ENSMUST00000123289 (Pyroxd1-003) 142346936-142357520 processed_transcript
ENSMUST00000137098 (Pyroxd1-002) 142345678-142362051 retained_intron
ENSMUST00000153912 (Pyroxd1-004) 142352940-142354691 retained_intron
ENSMUSG00000041681 (Iapp)
islet amyloid polypeptide 		ENSMUST00000041993 (Iapp-001) 142298423-142303961 protein_coding
ENSMUST00000141583 (Iapp-002) 142298447-142299066 processed_transcript
ENSMUSG00000063975 (Slco1a5)
solute carrier organic anion transporter family, member 1a5 		ENSMUST00000081380 (Slco1a5-001) 142234227-142322981 protein_coding
ENSMUST00000111822 (Slco1a5-003) 142247583-142278836 retained_intron
ENSMUST00000111825 (Slco1a5-002) 142234227-142278836 protein_coding
ENSMUST00000128446 (Slco1a5-005) 142254460-142322948 protein_coding
ENSMUST00000153268 (Slco1a5-004) 142234227-142275568 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XQ_0001ENSDARG00000033586ENSDART00000042663ENSDARG00000074122ENSDART00000111930CIL_0006XQ_0002ENSG00000084453ENST00000307378ENST00000413682ENST00000416627ENST00000421287ENST00000421294ENST00000422327ENST00000430803ENST00000435179ENST00000445053ENST00000450590ENST00000453443ENST00000458504ENST00000463718ENST00000473830ENST00000480394ENST00000544020ENST00000544290ENSG00000121350ENST00000240651ENST00000375266ENST00000536851ENST00000538072ENST00000538582ENST00000538615ENST00000543476ENST00000544187ENST00000544970ENSG00000121351ENST00000240652ENST00000535428ENST00000537593ENST00000539393ENST00000542023ENSG00000256021ENST00000540463CIL_0006XQ_0003ENSMUSG00000030243ENSMUST00000032370ENSMUST00000100832ENSMUST00000111803ENSMUST00000123912ENSMUST00000128082ENSMUST00000129694ENSMUST00000138578ENSMUST00000141504ENSMUST00000143102ENSMUST00000154870ENSMUST00000155149ENSMUSG00000041671ENSMUST00000041852ENSMUST00000123289ENSMUST00000137098ENSMUST00000153912ENSMUSG00000041681ENSMUST00000041993ENSMUST00000141583ENSMUSG00000063975ENSMUST00000081380ENSMUST00000111822ENSMUST00000111825ENSMUST00000128446ENSMUST00000153268
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XQ_0001ENSDARG00000033586ENSDART00000042663ENSDARG00000074122ENSDART00000111930CIL_0006XQ_0002ENSG00000084453ENST00000307378ENST00000416627ENST00000421294ENST00000430803ENST00000435179ENST00000450590ENST00000458504ENST00000463718ENST00000480394ENST00000544290ENSG00000121350ENST00000240651ENST00000375266ENST00000543476ENSG00000121351ENST00000240652ENST00000535428ENST00000537593ENST00000539393ENSG00000256021ENST00000540463CIL_0006XQ_0003ENSMUSG00000030243ENSMUST00000032370ENSMUST00000111803ENSMUST00000128082ENSMUST00000141504ENSMUST00000154870ENSMUST00000155149ENSMUSG00000041671ENSMUST00000041852ENSMUST00000123289ENSMUSG00000041681ENSMUST00000041993ENSMUSG00000063975ENSMUST00000081380ENSMUST00000111822ENSMUST00000111825ENSMUST00000128446ENSMUST00000153268
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033586 ENSDART00000042663 N/A N/A N/A 0.915±0.00 N/A N/A N/A N/A 1.020±0.00 N/A N/A N/A N/A N/A
ENSDARG00000074122 ENSDART00000111930 N/A N/A N/A 3.852±1.88 N/A N/A 0.136±0.00 1.272±0.00 N/A N/A 1.210±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000084453 ENST00000307378 N/A N/A 0.055±0.00 N/A N/A N/A 0.004±0.00 0.438±0.00 0.040±0.00 N/A N/A 0.012±0.00 0.026±0.01 0.034±0.02
ENST00000413682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416627 0.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.313±0.00
ENST00000421287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A
ENST00000422327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430803 N/A N/A N/A N/A N/A 0.142±0.00 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000435179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A
ENST00000445053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450590 N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458504 N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 0.123±0.00 0.307±0.00 N/A 0.004±0.00 N/A N/A
ENST00000463718 0.024±0.00 N/A 0.085±0.00 N/A 0.210±0.00 0.034±0.00 0.010±0.00 N/A 0.062±0.00 0.099±0.00 0.017±0.00 0.012±0.00 N/A 0.117±0.00
ENST00000473830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480394 N/A N/A N/A 2.901±0.00 N/A N/A N/A 2.582±0.00 0.050±0.00 N/A N/A N/A 0.023±0.00 N/A
ENST00000544020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00
ENSG00000121350 ENST00000240651 N/A 1.651±0.00 N/A 0.960±0.00 1.451±0.00 1.202±0.00 1.355±0.00 1.827±0.56 1.115±0.04 0.822±0.00 1.243±0.25 2.193±0.67 0.764±0.07 1.150±0.06
ENST00000375266 N/A N/A 1.257±0.00 2.407±0.00 3.599±0.00 3.314±0.00 2.023±0.00 2.215±0.00 3.390±0.00 3.727±0.00 N/A 5.890±0.00 N/A 4.858±0.08
ENST00000536851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.956±0.00
ENST00000544187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000121351 ENST00000240652 0.005±0.00 0.119±0.00 N/A 0.033±0.00 0.026±0.00 N/A 0.041±0.00 0.037±0.00 0.004±0.00 0.019±0.00 N/A 0.013±0.00 N/A 0.027±0.00
ENST00000535428 N/A N/A N/A N/A N/A N/A N/A 2.437±0.00 N/A N/A N/A N/A N/A 0.430±0.00
ENST00000537593 N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000539393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.06
ENST00000542023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256021 ENST00000540463 0.026±0.00 N/A 0.383±0.00 0.081±0.00 0.026±0.00 0.462±0.00 0.024±0.00 0.186±0.00 N/A 0.523±0.00 0.023±0.00 0.456±0.36 N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030243 ENSMUST00000032370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.027±0.00 7.670±3.61
ENSMUST00000100832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111803 2.178±0.66 1.126±0.23 4.646±0.35 4.911±1.78 1.519±0.21 1.593±0.11 0.895±0.31 1.433±0.55 4.441±4.11 3.425±0.20 1.689±0.35 2.000±1.07 4.985±1.62 3.840±1.07
ENSMUST00000123912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.693±14.19 N/A
ENSMUST00000129694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141504 0.993±0.16 0.935±0.16 N/A 2.002±0.10 1.444±0.53 1.651±0.14 0.434±0.04 0.691±0.11 0.556±0.26 1.395±0.17 0.439±0.03 1.271±0.28 2.013±0.56 N/A
ENSMUST00000143102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.045±0.00 N/A N/A
ENSMUST00000155149 N/A N/A N/A 14.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 29.082±13.05 57.625±0.00
ENSMUSG00000041671 ENSMUST00000041852 1.809±0.29 4.361±0.41 2.718±0.48 2.709±0.17 1.477±0.49 4.037±0.76 1.127±0.18 2.308±0.22 1.762±0.27 2.531±0.31 1.037±0.24 2.662±0.69 2.368±0.29 2.436±0.24
ENSMUST00000123289 N/A N/A N/A 7.383±0.00 N/A N/A N/A N/A N/A N/A 3.028±0.40 11.115±4.19 10.584±0.00 N/A
ENSMUST00000137098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041681 ENSMUST00000041993 N/A N/A N/A 0.076±0.03 N/A 1.495±0.39 N/A N/A 0.135±0.11 0.113±0.05 N/A 0.027±0.00 N/A 0.082±0.03
ENSMUST00000141583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063975 ENSMUST00000081380 N/A N/A N/A 0.076±0.01 0.119±0.03 N/A 0.056±0.00 N/A N/A 0.055±0.01 0.014±0.00 0.681±0.48 N/A 0.187±0.09
ENSMUST00000111822 N/A N/A N/A N/A 0.069±0.03 N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 0.052±0.00
ENSMUST00000111825 N/A N/A N/A N/A 0.050±0.03 N/A N/A N/A N/A 0.162±0.07 N/A N/A N/A 0.039±0.00
ENSMUST00000128446 N/A N/A N/A N/A 0.363±0.00 N/A N/A N/A N/A 0.618±0.00 0.047±0.00 0.552±0.12 N/A N/A
ENSMUST00000153268 0.034±0.01 N/A 0.003±0.00 N/A 0.265±0.09 0.051±0.00 0.030±0.00 N/A N/A 0.176±0.00 N/A 0.162±0.06 0.019±0.02 N/A

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