C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000121766 ZCCHC17 9606 + 1:31296982-31364953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344147 ZCCHC17-001 31296995-31364936 protein_coding
  ENST00000373714 ZCCHC17-002 31297008-31364936 protein_coding
  ENST00000422613 ZCCHC17-201 31297024-31364502 protein_coding
  ENST00000479629 ZCCHC17-004 31296998-31348968 processed_transcript
  ENST00000490049 ZCCHC17-003 31297047-31338961 processed_transcript
  ENST00000546109 ZCCHC17-202 31296982-31364953 protein_coding
  ENST00000615916 ZCCHC17-203 31296982-31364953 protein_coding
  ENST00000616393 ZCCHC17-204 31296982-31364953 protein_coding
  ENST00000616859 ZCCHC17-205 31296982-31364953 protein_coding
  ENST00000618216 ZCCHC17-206 31296982-31364953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344147ENST00000373714ENST00000422613ENST00000479629ENST00000546109ENST00000615916ENST00000616393ENST00000616859ENST00000618216
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344147 6.175±0.00 N/A 1.571±0.00 9.635±0.19 4.331±3.78 4.985±4.06 1.963±0.00 4.978±0.00 1.508±0.53 3.459±1.04 N/A 8.406±4.54 12.044±2.59 16.096±0.00
ENST00000373714 N/A N/A N/A N/A N/A 1.398±0.87 N/A 2.663±0.00 N/A 0.654±0.00 N/A N/A N/A N/A
ENST00000422613 3.522±0.00 6.415±0.00 N/A 12.420±0.00 2.183±1.20 0.810±0.00 N/A 4.816±0.00 N/A N/A N/A 4.468±0.00 N/A 10.021±0.00
ENST00000479629 N/A N/A N/A N/A N/A N/A N/A N/A 2.085±0.00 N/A N/A 2.282±0.00 N/A N/A
ENST00000546109 N/A N/A N/A 4.102±1.77 N/A N/A N/A 1.564±0.00 N/A N/A N/A N/A N/A N/A
ENST00000615916 N/A 2.519±0.00 N/A N/A N/A N/A 2.855±0.00 3.150±0.00 N/A 3.932±0.00 N/A 8.716±0.00 7.887±0.00 19.539±0.00
ENST00000616393 N/A N/A N/A N/A N/A 2.972±0.00 2.347±0.00 N/A 0.781±0.00 N/A 1.161±0.00 N/A N/A N/A
ENST00000616859 N/A 5.125±0.00 N/A 5.249±0.00 N/A N/A N/A N/A N/A N/A 0.484±0.09 N/A N/A 6.948±0.00
ENST00000618216 1.803±0.00 N/A N/A N/A N/A N/A 6.216±0.00 N/A 2.508±0.00 2.006±0.00 2.877±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0008270 IEA zinc ion binding
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018936 zcchc17 zinc finger, CCHC domain containing 17 protein_coding Danio_rerio
ENSMUSG00000028772 Zcchc17 zinc finger, CCHC domain containing 17 protein_coding Mus_musculus

Loading