C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344147 ZCCHC17-001 ENSG00000121766 9606 + 1:31296995-31364936 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000344147
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000344147 6.175±0.00 1.571±0.00 9.635±0.19 4.331±3.78 4.985±4.06 1.963±0.00 4.978±0.00 1.508±0.53 3.459±1.04 8.406±4.54 12.044±2.59 16.096±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134159 Zcchc17-001 protein_coding Mus_musculus 0 1022
ENSMUST00000030555 Gm12582-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000149755 Zcchc17-004 processed_transcript Mus_musculus 0 708
ENSMUST00000129840 Zcchc17-002 processed_transcript Mus_musculus 0 287
ENSMUST00000167964 Zcchc17-005 retained_intron Mus_musculus 6e-37 159

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