C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptic vesicle glycoprotein 2C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122012 SV2C 9606 + 5:76083172-76353939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322285 SV2C-002 76083414-76353939 protein_coding
  ENST00000502798 SV2C-001 76083172-76333956 protein_coding
  ENST00000506257 SV2C-004 76291765-76296122 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322285ENST00000502798
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322285 N/A N/A N/A 0.038±0.00 0.103±0.04 0.025±0.00 0.017±0.00 0.082±0.00 0.033±0.00 0.004±0.00 N/A N/A 0.049±0.00
ENST00000502798 0.046±0.00 0.087±0.00 1.724±0.11 0.065±0.01 0.083±0.03 0.040±0.01 0.041±0.00 0.023±0.00 0.061±0.01 0.004±0.00 0.073±0.06 0.004±0.00 0.117±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000778 CIL_000778_0002 CGP 5:75674124-76353939

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0008021 TAS synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0030054 IEA cell junction
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059997 sv2c synaptic vesicle glycoprotein 2C protein_coding Danio_rerio
ENSDARG00000086965 SV2C (2 of 2) synaptic vesicle glycoprotein 2C protein_coding Danio_rerio
ENSMUSG00000051111 Sv2c synaptic vesicle glycoprotein 2c protein_coding Mus_musculus

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