C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptic vesicle glycoprotein 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322285 SV2C-002 ENSG00000122012 9606 + 5:76083414-76353939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungMuscleTestisENST00000322285
Transcript ID Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000322285 0.038±0.00 0.103±0.04 0.025±0.00 0.017±0.00 0.082±0.00 0.033±0.00 0.004±0.00 0.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000778 CIL_000778_0002 CGP 5:75674124-76353939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161263 Sv2c-001 protein_coding Mus_musculus 0 2483
ENSMUST00000182289 Sv2c-002 protein_coding Mus_musculus 0 2481
ENSMUST00000182180 Sv2c-003 processed_transcript Mus_musculus 0 763

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