C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptic vesicle glycoprotein 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502798 SV2C-001 ENSG00000122012 9606 + 5:76083172-76333956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502798
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502798 0.046±0.00 0.087±0.00 1.724±0.11 0.065±0.01 0.083±0.03 0.040±0.01 0.041±0.00 0.023±0.00 0.061±0.01 0.004±0.00 0.073±0.06 0.004±0.00 0.117±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000778 CIL_000778_0002 CGP 5:75674124-76353939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0008021 TAS synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0030054 IEA cell junction
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161263 Sv2c-001 protein_coding Mus_musculus 0 2782
ENSMUST00000182289 Sv2c-002 protein_coding Mus_musculus 0 2483
ENSMUST00000182180 Sv2c-003 processed_transcript Mus_musculus 0 1016

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