C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122477 LRRC39 9606 - 1:100148449-100178273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342895 LRRC39-201 100148449-100178273 protein_coding
  ENST00000370137 LRRC39-001 100148853-100178215 protein_coding
  ENST00000370138 LRRC39-002 100148853-100178215 protein_coding
  ENST00000620882 LRRC39-202 100148449-100178273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342895ENST00000370137ENST00000370138ENST00000620882
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342895 0.473±0.00 1.065±0.00 N/A 0.794±0.08 N/A 10.458±0.00 N/A N/A 0.283±0.00 2.541±0.00 1.000±0.00 0.397±0.10 1.800±0.00
ENST00000370137 N/A N/A N/A N/A N/A 32.057±15.75 0.566±0.00 N/A N/A 19.130±10.00 N/A N/A 2.617±0.00
ENST00000370138 N/A N/A N/A 1.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620882 N/A 0.695±0.00 0.567±0.00 0.980±0.00 0.922±0.00 N/A 1.676±0.00 0.479±0.00 N/A N/A N/A N/A 1.457±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071465 lrrc39 leucine rich repeat containing 39 protein_coding Danio_rerio
ENSMUSG00000027961 Lrrc39 leucine rich repeat containing 39 protein_coding Mus_musculus

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