C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intraflagellar transport 81
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122970 IFT81 9606 + 12:110124335-110218797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000242591 IFT81-003 110124377-110218797 protein_coding
  ENST00000361948 IFT81-001 110124335-110169182 protein_coding
  ENST00000546374 IFT81-004 110124392-110163065 protein_coding
  ENST00000549009 IFT81-009 110136807-110163040 processed_transcript
  ENST00000550156 IFT81-008 110127473-110218786 nonsense_mediated_decay
  ENST00000550748 IFT81-007 110203335-110218560 retained_intron
  ENST00000551055 IFT81-006 110171895-110191061 processed_transcript
  ENST00000551273 IFT81-005 110132593-110163065 nonsense_mediated_decay
  ENST00000552912 IFT81-002 110124335-110218775 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000242591ENST00000361948ENST00000546374ENST00000550156ENST00000550748ENST00000551273ENST00000552912
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000242591 0.342±0.00 N/A N/A 0.601±0.09 0.396±0.00 1.209±0.83 0.274±0.10 0.577±0.00 0.775±0.00 0.781±0.00 N/A 1.072±0.50 0.234±0.13 3.073±0.00
ENST00000361948 0.211±0.00 N/A 0.629±0.00 N/A N/A 0.179±0.00 0.220±0.05 N/A 0.106±0.00 0.311±0.00 0.041±0.00 N/A 0.122±0.00 N/A
ENST00000546374 N/A N/A N/A 0.680±0.00 N/A 0.439±0.00 N/A 1.576±0.00 N/A N/A 0.419±0.00 N/A N/A N/A
ENST00000550156 0.484±0.00 0.842±0.00 N/A N/A N/A N/A N/A 0.688±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550748 N/A 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551273 N/A N/A N/A 1.481±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552912 N/A 0.956±0.00 1.380±0.00 1.511±0.63 1.100±0.00 0.306±0.00 0.561±0.00 0.343±0.00 0.763±0.64 0.670±0.35 0.778±0.00 2.914±0.78 0.722±0.39 19.600±11.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QG CIL_0001QG_0002 CGP 12:110124335-110351093

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005813 IBA centrosome
GO:0005929 IBA cilium
GO:0007283 ISS spermatogenesis
GO:0015631 IDA tubulin binding
GO:0030992 ISS intraciliary transport particle B
GO:0031514 ISS motile cilium
GO:0035735 IMP intraciliary transport involved in cilium morphogenesis
GO:0042073 IEA intraciliary transport
GO:0042384 IMP cilium assembly
GO:0097225 IEA sperm midpiece
GO:0097228 IEA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007444 ift81 intraflagellar transport 81 homolog protein_coding Danio_rerio
ENSMUSG00000029469 Ift81 intraflagellar transport 81 protein_coding Mus_musculus

Loading