C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 81
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000242591 IFT81-003 ENSG00000122970 9606 + 12:110124377-110218797 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000242591
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000242591 0.342±0.00 0.601±0.09 0.396±0.00 1.209±0.83 0.274±0.10 0.577±0.00 0.775±0.00 0.781±0.00 1.072±0.50 0.234±0.13 3.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QG CIL_0001QG_0002 CGP 12:110124335-110351093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005813 IBA centrosome
GO:0005929 IBA cilium
GO:0007283 ISS spermatogenesis
GO:0015631 IDA tubulin binding
GO:0030992 ISS intraciliary transport particle B
GO:0031514 ISS motile cilium
GO:0035735 IMP intraciliary transport involved in cilium morphogenesis
GO:0042384 IMP cilium assembly
GO:0097225 IEA sperm midpiece
GO:0097228 IEA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031426 Ift81-001 protein_coding Mus_musculus 0 2401
ENSMUST00000144065 Ift81-006 retained_intron Mus_musculus 0 893
ENSMUST00000127220 Ift81-004 protein_coding Mus_musculus 0 819
ENSMUST00000139590 Ift81-005 processed_transcript Mus_musculus 0 656
ENSMUST00000135956 Ift81-002 retained_intron Mus_musculus 0 569
ENSMUST00000136024 Ift81-003 nonsense_mediated_decay Mus_musculus 0 287
ENSMUST00000139447 Ift81-007 processed_transcript Mus_musculus 0 283
ENSMUST00000128421 Zfp61-007 processed_transcript Mus_musculus 0.00006 55

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