C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 12 (potassium/chloride transporter), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124140 SLC12A5 9606 + 20:46021717-46060150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243964 SLC12A5-002 46029247-46060150 protein_coding
  ENST00000372315 SLC12A5-001 46029196-46041160 protein_coding
  ENST00000413737 SLC12A5-008 46021850-46023589 processed_transcript
  ENST00000428198 SLC12A5-007 46021776-46027799 processed_transcript
  ENST00000454036 SLC12A5-003 46021717-46057702 protein_coding
  ENST00000539566 SLC12A5-004 46029224-46049653 nonsense_mediated_decay
  ENST00000608594 SLC12A5-006 46043197-46043864 processed_transcript
  ENST00000608944 SLC12A5-005 46029009-46036805 protein_coding
  ENST00000616201 SLC12A5-201 46029182-46060150 protein_coding
  ENST00000616202 SLC12A5-202 46029182-46060150 protein_coding
  ENST00000616933 SLC12A5-203 46029182-46060150 protein_coding
  ENST00000622711 SLC12A5-204 46029182-46041160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverMuscleTestisENST00000243964ENST00000413737ENST00000428198ENST00000454036ENST00000616202ENST00000616933
Transcript ID Bladder Brain Colon Kidney Liver Muscle Testis
ENST00000243964 0.058±0.00 16.502±4.64 N/A N/A N/A N/A N/A
ENST00000413737 N/A N/A 1.203±0.00 0.392±0.00 N/A 1.562±0.00 10.952±0.00
ENST00000428198 N/A N/A N/A N/A N/A 0.786±0.00 N/A
ENST00000454036 N/A 5.125±0.00 0.095±0.00 N/A N/A N/A N/A
ENST00000616202 0.145±0.00 16.646±0.00 N/A 0.038±0.00 0.084±0.00 N/A N/A
ENST00000616933 N/A 2.398±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GI CIL_0006GI_0001 CGP 20:46008908-46060150
CIL_0007BH CIL_0007BH_0001 CGP 20:46021717-46089952

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006810 NAS:IEA transport
GO:0006811 TAS:IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0006821 IEA chloride transport
GO:0006873 NAS cellular ion homeostasis
GO:0007268 IEA synaptic transmission
GO:0007612 IEA learning
GO:0015377 IEA cation:chloride symporter activity
GO:0015379 IEA:NAS potassium:chloride symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA:NAS integral component of membrane
GO:0019901 IPI protein kinase binding
GO:0035264 IEA multicellular organism growth
GO:0040040 IEA thermosensory behavior
GO:0042493 IEA response to drug
GO:0043025 IEA neuronal cell body
GO:0043198 IEA dendritic shaft
GO:0055085 TAS:IEA transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075815 slc12a5a solute carrier family 12 (potassium/chloride transporter), member 5a protein_coding Danio_rerio
ENSDARG00000078187 slc12a5b solute carrier family 12 (potassium/chloride transporter), member 5b protein_coding Danio_rerio
ENSMUSG00000017740 Slc12a5 solute carrier family 12, member 5 protein_coding Mus_musculus

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