C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 12, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017740 Slc12a5 10090 + 2:164960816-164999727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099092 Slc12a5-001 164967983-164999727 protein_coding
  ENSMUST00000124372 Slc12a5-003 164960816-164974540 protein_coding
  ENSMUST00000135918 Slc12a5-004 164982437-164986645 retained_intron
  ENSMUST00000137302 Slc12a5-002 164996591-164999727 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099092ENSMUST00000124372ENSMUST00000137302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099092 0.791±0.59 3.384±0.72 0.100±0.00 41.110±20.17 0.378±0.00 0.199±0.10 0.096±0.02 0.239±0.10 0.189±0.07 0.438±0.17 0.079±0.05 0.762±0.31 0.094±0.08 2.073±1.60
ENSMUST00000124372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.331±0.00 N/A 13.401±0.00
ENSMUST00000137302 N/A 2.813±0.01 N/A N/A 0.500±0.00 0.245±0.02 0.074±0.00 N/A 0.131±0.08 0.371±0.03 0.113±0.08 N/A 0.038±0.01 1.792±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GI CIL_0006GI_0002 CGP 2:164940780-164999727
CIL_0007BH CIL_0007BH_0002 CGP 2:164960816-165034867

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0006821 IMP chloride transport
GO:0007268 IMP synaptic transmission
GO:0007612 IMP learning
GO:0015379 IMP potassium:chloride symporter activity
GO:0016021 IEA integral component of membrane
GO:0019901 IEA protein kinase binding
GO:0035264 IMP multicellular organism growth
GO:0040040 IMP thermosensory behavior
GO:0042493 IMP response to drug
GO:0043025 IDA neuronal cell body
GO:0043198 IDA dendritic shaft
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075815 slc12a5a solute carrier family 12 (potassium/chloride transporter), member 5a protein_coding Danio_rerio
ENSDARG00000078187 slc12a5b solute carrier family 12 (potassium/chloride transporter), member 5b protein_coding Danio_rerio
ENSG00000124140 SLC12A5 solute carrier family 12 (potassium/chloride transporter), member 5 protein_coding Homo_sapiens

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