C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class T
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124155 PIGT 9606 + 20:45416077-45426244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000279035 PIGT-004 45416110-45426042 protein_coding
  ENST00000279036 PIGT-001 45416077-45426244 protein_coding
  ENST00000372689 PIGT-005 45416137-45426241 protein_coding
  ENST00000432270 PIGT-002 45416183-45420594 protein_coding
  ENST00000455050 PIGT-006 45416141-45425977 nonsense_mediated_decay
  ENST00000543458 PIGT-007 45416144-45426244 protein_coding
  ENST00000545755 PIGT-008 45420632-45424741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279035ENST00000279036ENST00000372689ENST00000455050ENST00000543458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279035 23.358±0.00 22.059±0.00 2.659±0.00 19.429±0.00 12.433±7.22 8.350±5.54 14.139±0.00 5.662±4.55 5.302±4.17 10.010±9.17 15.892±13.25 23.986±5.39 21.410±3.15 20.789±0.00
ENST00000279036 28.266±0.00 29.674±0.00 N/A 13.037±6.68 16.417±13.53 11.699±10.22 18.940±15.30 16.206±12.75 15.245±0.00 27.160±0.00 48.720±0.00 29.310±17.69 40.842±21.28 29.582±0.00
ENST00000372689 N/A N/A N/A N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A 22.066±0.00 18.477±0.00 14.238±0.00
ENST00000455050 N/A N/A N/A N/A N/A N/A N/A 1.142±0.00 N/A 0.611±0.00 N/A N/A N/A N/A
ENST00000543458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.113±0.00 10.843±0.00 9.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L0 CIL_0003L0_0001 CGP 20:45406057-45426244
CIL_0006IJ CIL_0006IJ_0001 CGP 20:45416077-45481532

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003923 TAS GPI-anchor transamidase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0016020 IDA membrane
GO:0016023 IEA cytoplasmic membrane-bounded vesicle
GO:0016255 IEA:TAS attachment of GPI anchor to protein
GO:0030176 NAS integral component of endoplasmic reticulum membrane
GO:0030182 IEA neuron differentiation
GO:0042765 TAS:IEA GPI-anchor transamidase complex
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0051402 IEA neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075842 pigt phosphatidylinositol glycan anchor biosynthesis, class T protein_coding Danio_rerio
ENSMUSG00000017721 Pigt phosphatidylinositol glycan anchor biosynthesis, class T protein_coding Mus_musculus

Loading