C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidylinositol glycan anchor biosynthesis, class T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455050 PIGT-006 ENSG00000124155 9606 + 20:45416141-45425977 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungENST00000455050
Transcript ID Kidney Lung
ENST00000455050 1.142±0.00 0.611±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L0 CIL_0003L0_0001 CGP 20:45406057-45426244
CIL_0006IJ CIL_0006IJ_0001 CGP 20:45416077-45481532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016255 IEA attachment of GPI anchor to protein
GO:0042765 IEA GPI-anchor transamidase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152522 Pigt-002 nonsense_mediated_decay Mus_musculus 0 1330
ENSMUST00000103101 Pigt-001 protein_coding Mus_musculus 0 1330
ENSMUST00000117066 Pigt-003 protein_coding Mus_musculus 0 725
ENSMUST00000131976 Pigt-005 retained_intron Mus_musculus 0 451
ENSMUST00000138038 Pigt-004 retained_intron Mus_musculus 0 431
ENSMUST00000122406 Gm12929-001 processed_pseudogene Mus_musculus 1.99993e-41 174

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