C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, NFX1-type containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124201 ZNFX1 9606 - 20:49237946-49278426 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371744 ZNFX1-002 49255808-49278041 protein_coding
  ENST00000371752 ZNFX1-001 49245897-49278065 protein_coding
  ENST00000371754 ZNFX1-004 49237946-49278426 protein_coding
  ENST00000396105 ZNFX1-201 49245900-49278219 protein_coding
  ENST00000455070 ZNFX1-003 49255933-49271223 protein_coding
  ENST00000469991 ZNFX1-005 49238943-49244752 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371744ENST00000371752ENST00000396105
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371744 N/A N/A N/A N/A N/A N/A 2.308±0.00 N/A 4.489±0.00 N/A N/A N/A N/A N/A
ENST00000371752 4.811±0.00 N/A 1.273±0.00 N/A 7.132±1.91 4.107±1.30 N/A 10.353±0.00 1.404±0.00 11.637±6.45 6.166±3.47 5.908±1.03 8.442±1.36 N/A
ENST00000396105 7.417±0.00 5.640±0.00 2.876±0.00 5.321±2.34 5.673±1.04 4.761±1.73 4.698±2.43 4.946±0.00 3.362±1.21 3.088±0.00 3.322±0.00 5.096±2.33 5.703±0.00 9.213±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T2 CIL_0001T2_0001 CGP 20:49113339-49244077
CIL_000279 CIL_000279_0001 CGP 20:49219295-49278426

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005488 IEA binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016787 IEA hydrolase activity
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074028 ZNFX1 zinc finger, NFX1-type containing 1 protein_coding Danio_rerio
ENSMUSG00000039501 Znfx1 zinc finger, NFX1-type containing 1 protein_coding Mus_musculus

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