C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, NFX1-type containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371752 ZNFX1-001 ENSG00000124201 9606 - 20:49245897-49278065 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000371752
Transcript ID Adipose Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000371752 4.811±0.00 1.273±0.00 7.132±1.91 4.107±1.30 10.353±0.00 1.404±0.00 11.637±6.45 6.166±3.47 5.908±1.03 8.442±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T2 CIL_0001T2_0001 CGP 20:49113339-49244077
CIL_000279 CIL_000279_0001 CGP 20:49219295-49278426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048988 Znfx1-001 protein_coding Mus_musculus 0 6083
ENSMUST00000067584 Znfx1-004 protein_coding Mus_musculus 0 3498
ENSMUST00000155281 Znfx1-003 protein_coding Mus_musculus 0 2573
ENSMUST00000128676 Znfx1-002 protein_coding Mus_musculus 0 2523
ENSMUST00000135967 Znfx1-005 retained_intron Mus_musculus 0 1958

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