C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 29
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125122 LRRC29 9606 - 16:67207139-67227048 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000393992 LRRC29-001 67207140-67226818 protein_coding
  ENST00000409037 LRRC29-005 67207140-67211085 protein_coding
  ENST00000409509 LRRC29-002 67207139-67227010 protein_coding
  ENST00000424285 LRRC29-007 67207880-67226877 protein_coding
  ENST00000433915 LRRC29-008 67207648-67227013 protein_coding
  ENST00000447579 LRRC29-009 67208390-67226788 protein_coding
  ENST00000462169 LRRC29-004 67210348-67227027 processed_transcript
  ENST00000485549 LRRC29-006 67210740-67227048 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000393992ENST00000409037ENST00000409509ENST00000424285ENST00000433915ENST00000447579ENST00000462169ENST00000485549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000393992 N/A N/A N/A 0.165±0.00 0.946±0.00 N/A 0.052±0.00 N/A N/A N/A 0.640±0.46 1.053±0.70 N/A
ENST00000409037 N/A N/A 0.581±0.00 N/A 0.200±0.00 N/A N/A N/A N/A N/A 0.263±0.00 N/A 0.279±0.00
ENST00000409509 0.177±0.00 0.555±0.00 N/A 0.442±0.06 N/A N/A N/A 1.306±0.00 0.517±0.00 0.368±0.28 0.492±0.00 0.461±0.01 0.729±0.00
ENST00000424285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 0.472±0.00 1.563±0.00
ENST00000433915 0.180±0.00 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A 0.141±0.00 0.605±0.31 0.931±0.00
ENST00000447579 N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A
ENST00000462169 N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485549 0.223±0.00 N/A N/A N/A N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003M1 CIL_0003M1_0002 CGP 16:67199111-67227048
CIL_0005K1 CIL_0005K1_0001 CGP 16:67207139-67229278

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076425 LRRC29 leucine rich repeat containing 29 protein_coding Danio_rerio
ENSMUSG00000041679 Lrrc29 leucine rich repeat containing 29 protein_coding Mus_musculus

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