C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003M1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042126-ENSDARG00000076425 CGP 7955 25:17790723-17854100
GeneTranscriptPositionBiotype
ENSDARG00000042126 (ELMO3)
engulfment and cell motility 3 		ENSDART00000061738 (ELMO3-201) 17790723-17835572 protein_coding
ENSDARG00000076425 (LRRC29)
leucine rich repeat containing 29 		ENSDART00000115187 (LRRC29-201) 17838438-17845653 protein_coding
ENSDART00000154134 (LRRC29-001) 17839000-17854100 protein_coding
CIL_0003M1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102890-ENSG00000125122 CGP 9606 16:67199111-67227048
GeneTranscriptPositionBiotype
ENSG00000102890 (ELMO3)
engulfment and cell motility 3 		ENST00000360833 (ELMO3-001) 67199111-67204029 protein_coding
ENST00000393997 (ELMO3-003) 67199111-67204029 protein_coding
ENST00000477898 (ELMO3-002) 67199509-67204029 protein_coding
ENST00000571587 (ELMO3-004) 67199166-67201548 nonsense_mediated_decay
ENST00000571638 (ELMO3-005) 67199951-67201599 processed_transcript
ENSG00000125122 (LRRC29)
leucine rich repeat containing 29 		ENST00000393992 (LRRC29-001) 67207140-67226818 protein_coding
ENST00000409037 (LRRC29-005) 67207140-67211085 protein_coding
ENST00000409509 (LRRC29-002) 67207139-67227010 protein_coding
ENST00000424285 (LRRC29-007) 67207880-67226877 protein_coding
ENST00000433915 (LRRC29-008) 67207648-67227013 protein_coding
ENST00000447579 (LRRC29-009) 67208390-67226788 protein_coding
ENST00000462169 (LRRC29-004) 67210348-67227027 processed_transcript
ENST00000485549 (LRRC29-006) 67210740-67227048 processed_transcript
ENSG00000280163 (CTC-277H1.6)
 ENST00000623816 (CTC-277H1.6-001) 67205175-67206849 TEC
CIL_0003M1_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014791-ENSMUSG00000041679 CGP 10090 8:105305601-105326276
GeneTranscriptPositionBiotype
ENSMUSG00000014791 (Elmo3)
engulfment and cell motility 3 		ENSMUST00000109375 (Elmo3-201) 105305601-105310623 protein_coding
ENSMUSG00000041679 (Lrrc29)
leucine rich repeat containing 29 		ENSMUST00000070508 (Lrrc29-201) 105312341-105326276 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M1_0001ENSDARG00000042126ENSDART00000061738ENSDARG00000076425ENSDART00000115187ENSDART00000154134CIL_0003M1_0002ENSG00000102890ENST00000360833ENST00000393997ENST00000477898ENST00000571587ENST00000571638ENSG00000125122ENST00000393992ENST00000409037ENST00000409509ENST00000424285ENST00000433915ENST00000447579ENST00000462169ENST00000485549ENSG00000280163ENST00000623816CIL_0003M1_0003ENSMUSG00000014791ENSMUST00000109375ENSMUSG00000041679ENSMUST00000070508
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M1_0001ENSDARG00000042126ENSDART00000061738ENSDARG00000076425ENSDART00000115187ENSDART00000154134CIL_0003M1_0002ENSG00000102890ENST00000360833ENST00000393997ENST00000477898ENST00000571638ENSG00000125122ENST00000393992ENST00000409037ENST00000409509ENST00000424285ENST00000433915ENST00000447579ENST00000462169ENST00000485549ENSG00000280163ENST00000623816CIL_0003M1_0003ENSMUSG00000014791ENSMUST00000109375ENSMUSG00000041679ENSMUST00000070508
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042126 ENSDART00000061738 N/A N/A N/A 1.561±0.19 N/A N/A 5.299±1.48 2.543±0.00 0.116±0.00 N/A 0.696±0.00 N/A N/A N/A
ENSDARG00000076425 ENSDART00000115187 N/A N/A N/A 1.637±0.62 N/A N/A 2.802±1.46 6.266±3.82 1.256±0.00 N/A 1.457±0.00 N/A N/A N/A
ENSDART00000154134 N/A N/A N/A 4.184±0.00 N/A N/A 0.839±0.62 N/A 1.455±0.00 N/A 1.294±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102890 ENST00000360833 N/A 0.234±0.00 N/A N/A 0.438±0.00 N/A N/A N/A 0.058±0.00 N/A N/A 0.510±0.00 1.776±0.00 N/A
ENST00000393997 N/A N/A N/A N/A 0.858±0.00 N/A N/A 3.161±0.00 0.097±0.00 1.011±0.00 N/A 0.945±0.29 3.145±0.21 N/A
ENST00000477898 N/A 0.920±0.00 0.426±0.00 0.084±0.06 1.034±0.00 1.349±0.20 0.114±0.00 2.626±2.38 N/A N/A 0.065±0.00 0.310±0.00 5.192±1.61 4.120±0.00
ENST00000571587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571638 N/A N/A N/A N/A 0.656±0.00 N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000125122 ENST00000393992 N/A N/A N/A 0.165±0.00 0.946±0.00 N/A 0.052±0.00 N/A N/A N/A N/A 0.640±0.46 1.053±0.70 N/A
ENST00000409037 N/A N/A 0.581±0.00 N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A 0.263±0.00 N/A 0.279±0.00
ENST00000409509 0.177±0.00 0.555±0.00 N/A 0.442±0.06 N/A N/A N/A 1.306±0.00 0.517±0.00 N/A 0.368±0.28 0.492±0.00 0.461±0.01 0.729±0.00
ENST00000424285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 0.472±0.00 1.563±0.00
ENST00000433915 0.180±0.00 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.141±0.00 0.605±0.31 0.931±0.00
ENST00000447579 N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A
ENST00000462169 N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485549 0.223±0.00 N/A N/A N/A N/A N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000280163 ENST00000623816 0.258±0.00 0.776±0.00 0.249±0.00 0.348±0.21 0.363±0.10 0.202±0.08 0.091±0.05 0.236±0.22 0.157±0.08 0.232±0.00 0.086±0.00 0.253±0.11 0.113±0.07 0.485±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014791 ENSMUST00000109375 7.663±0.47 6.166±0.31 8.464±1.30 0.623±0.06 6.730±2.34 31.381±5.49 0.880±0.26 18.587±2.20 7.839±3.81 16.674±0.26 0.569±0.10 6.970±3.28 2.808±1.34 2.150±0.00
ENSMUSG00000041679 ENSMUST00000070508 2.586±0.20 2.509±1.40 2.027±0.52 0.583±0.09 2.785±0.49 2.672±0.87 0.276±0.01 2.649±0.44 4.925±3.23 2.912±0.40 0.235±0.09 1.281±0.78 1.325±0.01 31.495±15.74

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