C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125375 ATP5S 9606 + 14:50312326-50335558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245448 ATP5S-002 50312329-50326226 protein_coding
  ENST00000311459 ATP5S-003 50312641-50334907 protein_coding
  ENST00000358473 ATP5S-011 50319234-50335558 protein_coding
  ENST00000426751 ATP5S-004 50312384-50322892 protein_coding
  ENST00000553774 ATP5S-009 50321533-50324116 retained_intron
  ENST00000554204 ATP5S-001 50312560-50326226 nonsense_mediated_decay
  ENST00000554438 ATP5S-010 50312326-50327059 processed_transcript
  ENST00000554951 ATP5S-005 50321319-50325677 processed_transcript
  ENST00000555939 ATP5S-006 50312335-50324706 processed_transcript
  ENST00000556962 ATP5S-007 50322542-50324291 retained_intron
  ENST00000557421 ATP5S-008 50312330-50325728 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000311459ENST00000554438ENST00000555939
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000311459 2.427±0.00 N/A 0.506±0.00 0.652±0.00 0.336±0.00 0.468±0.00 0.499±0.00 1.320±0.00 0.715±0.06 N/A 0.921±0.00
ENST00000554438 N/A 3.898±0.00 3.939±0.00 N/A 2.223±0.00 N/A 1.531±0.00 3.376±0.00 2.626±0.00 2.374±0.40 3.447±0.00
ENST00000555939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.624±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HL CIL_0005HL_0002 CGP 14:50117120-50312548
CIL_0005HM CIL_0005HM_0002 CGP 14:50237563-50335558
CIL_0005HN CIL_0005HN_0002 CGP 14:50312326-50416461

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006754 IEA ATP biosynthetic process
GO:0015078 NAS hydrogen ion transmembrane transporter activity
GO:0015992 NAS proton transport
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 IEA metal ion binding
GO:1902600 NAS hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012072 atp5s ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s protein_coding Danio_rerio
ENSMUSG00000054894 Atp5s ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S protein_coding Mus_musculus

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