C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554438 ATP5S-010 ENSG00000125375 9606 + 14:50312326-50327059 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverMuscleOvaryPlacentaTestisENST00000554438
Transcript ID Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENST00000554438 3.898±0.00 3.939±0.00 2.223±0.00 1.531±0.00 3.376±0.00 2.626±0.00 2.374±0.40 3.447±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HL CIL_0005HL_0002 CGP 14:50117120-50312548
CIL_0005HM CIL_0005HM_0002 CGP 14:50237563-50335558
CIL_0005HN CIL_0005HN_0002 CGP 14:50312326-50416461

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021372 Atp5s-201 protein_coding Mus_musculus 0 691
ENSMUST00000129612 L1cam-002 retained_intron Mus_musculus 0.00000002 66
ENSMUST00000022172 Polk-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000002172 Acp2-001 protein_coding Mus_musculus 0.00000006 64
ENSMUST00000093239 Mtif2-201 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000020749 Mtif2-002 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000109930 Ascc2-002 protein_coding Mus_musculus 0.0001 53
ENSMUST00000053760 Utp14b-001 protein_coding Mus_musculus 0.0001 53

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