C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311459 ATP5S-003 ENSG00000125375 9606 + 14:50312641-50334907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000311459
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000311459 2.427±0.00 0.506±0.00 0.652±0.00 0.336±0.00 0.468±0.00 0.499±0.00 1.320±0.00 0.715±0.06 0.921±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HL CIL_0005HL_0002 CGP 14:50117120-50312548
CIL_0005HM CIL_0005HM_0002 CGP 14:50237563-50335558
CIL_0005HN CIL_0005HN_0002 CGP 14:50312326-50416461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006754 IEA ATP biosynthetic process
GO:0015078 NAS hydrogen ion transmembrane transporter activity
GO:0015992 NAS proton transport
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 IEA metal ion binding
GO:1902600 NAS hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021372 Atp5s-201 protein_coding Mus_musculus 0 688
ENSMUST00000129612 L1cam-002 retained_intron Mus_musculus 0.00000009 66
ENSMUST00000022172 Polk-201 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000002172 Acp2-001 protein_coding Mus_musculus 0.0000003 64
ENSMUST00000093239 Mtif2-201 protein_coding Mus_musculus 0.000001 62
ENSMUST00000020749 Mtif2-002 protein_coding Mus_musculus 0.000001 62
ENSMUST00000109930 Ascc2-002 protein_coding Mus_musculus 0.0007 53

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