C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125430 HS3ST3B1 9606 + 17:14301083-14349404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360954 HS3ST3B1-001 14301083-14349404 protein_coding
  ENST00000466596 HS3ST3B1-002 14301083-14349144 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360954ENST00000466596
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360954 0.480±0.00 1.565±0.00 0.406±0.00 0.412±0.13 0.323±0.02 0.588±0.04 0.364±0.01 2.712±1.06 4.090±3.70 0.382±0.25 0.051±0.02 0.973±0.69 1.115±0.34 0.251±0.10
ENST00000466596 N/A 0.931±0.00 0.226±0.00 N/A 0.177±0.01 0.484±0.15 0.127±0.00 1.618±0.19 5.195±0.00 0.849±0.30 0.298±0.00 0.530±0.33 1.198±0.37 0.396±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y3 CIL_0005Y3_0002 CGP 17:14301083-15265326

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0008146 IEA sulfotransferase activity
GO:0008467 TAS [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0015012 TAS heparan sulfate proteoglycan biosynthetic process
GO:0015015 TAS heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0033872 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 3 activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059594 hs3st3b1a heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a protein_coding Danio_rerio
ENSDARG00000086645 hs3st3b1b heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b protein_coding Danio_rerio
ENSMUSG00000047759 Hs3st3a1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 protein_coding Mus_musculus
ENSMUSG00000070407 Hs3st3b1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 protein_coding Mus_musculus

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