C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Y3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086645-ENSDARG00000060457 CGP 7955 12:38509796-38837515
GeneTranscriptPositionBiotype
ENSDARG00000060457 (pmp22b)
peripheral myelin protein 22b 		ENSDART00000085201 (pmp22b-001) 38813180-38837515 protein_coding
ENSDART00000146142 (pmp22b-002) 38815539-38837490 protein_coding
ENSDARG00000086645 (hs3st3b1b)
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b 		ENSDART00000125900 (hs3st3b1b-001) 38509796-38544145 protein_coding
CIL_0005Y3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125430-ENSG00000109099 CGP 9606 17:14301083-15265326
GeneTranscriptPositionBiotype
ENSG00000109099 (PMP22)
peripheral myelin protein 22 		ENST00000312280 (PMP22-002) 15229778-15265307 protein_coding
ENST00000395936 (PMP22-003) 15230797-15262541 protein_coding
ENST00000395938 (PMP22-001) 15229778-15262589 protein_coding
ENST00000426385 (PMP22-008) 15239341-15262516 protein_coding
ENST00000471150 (PMP22-005) 15260280-15265308 retained_intron
ENST00000494511 (PMP22-004) 15230516-15265319 protein_coding
ENST00000580497 (PMP22-007) 15258737-15260768 retained_intron
ENST00000580584 (PMP22-006) 15231067-15265326 protein_coding
ENST00000612492 (PMP22-201) 15229777-15262589 protein_coding
ENSG00000125430 (HS3ST3B1)
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 		ENST00000360954 (HS3ST3B1-001) 14301083-14349404 protein_coding
ENST00000466596 (HS3ST3B1-002) 14301083-14349144 nonsense_mediated_decay
ENSG00000205325 (AC005863.1)
 ENST00000379640 (AC005863.1-001) 14767583-14780203 lincRNA
ENSG00000226156 (RPL23AP76)
ribosomal protein L23a pseudogene 76 		ENST00000441860 (RPL23AP76-001) 14947741-14948198 processed_pseudogene
ENSG00000230647 (AC022816.2)
 ENST00000436469 (AC022816.2-001) 14374139-14421026 lincRNA
ENSG00000230897 (RPS18P12)
ribosomal protein S18 pseudogene 12 		ENST00000412454 (RPS18P12-001) 14705076-14705534 processed_pseudogene
ENSG00000232058 (AC005772.2)
 ENST00000446671 (AC005772.2-001) 15014805-15052276 lincRNA
ENSG00000238212 (AC005863.2)
 ENST00000445035 (AC005863.2-001) 14834638-14900554 lincRNA
ENSG00000259944 (CDRT7)
CMT1A duplicated region transcript 7 (non-protein coding) 		ENST00000568256 (CDRT7-001) 15030975-15031957 lincRNA
ENSG00000265163 (CDRT8)
CMT1A duplicated region transcript 8 		ENST00000579752 (CDRT8-001) 15105237-15106187 lincRNA
ENSG00000266378 (RP11-214O1.3)
 ENST00000584683 (RP11-214O1.3-001) 14327335-14329474 lincRNA
ENSG00000266709 (MGC12916)
uncharacterized protein MGC12916 		ENST00000583262 (MGC12916-001) 14303854-14305505 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y3_0001ENSDARG00000060457ENSDART00000085201ENSDART00000146142ENSDARG00000086645ENSDART00000125900CIL_0005Y3_0002ENSG00000109099ENST00000312280ENST00000395936ENST00000395938ENST00000426385ENST00000471150ENST00000494511ENST00000580497ENST00000580584ENST00000612492ENSG00000125430ENST00000360954ENST00000466596ENSG00000205325ENST00000379640ENSG00000226156ENST00000441860ENSG00000230647ENST00000436469ENSG00000230897ENST00000412454ENSG00000232058ENST00000446671ENSG00000238212ENST00000445035ENSG00000259944ENST00000568256ENSG00000265163ENST00000579752ENSG00000266378ENST00000584683ENSG00000266709ENST00000583262
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y3_0001ENSDARG00000060457ENSDART00000085201ENSDART00000146142ENSDARG00000086645ENSDART00000125900CIL_0005Y3_0002ENSG00000109099ENST00000312280ENST00000395936ENST00000395938ENST00000494511ENST00000612492ENSG00000125430ENST00000360954ENST00000466596ENSG00000205325ENST00000379640ENSG00000226156ENST00000441860ENSG00000230647ENST00000436469ENSG00000230897ENST00000412454ENSG00000232058ENST00000446671ENSG00000238212ENST00000445035ENSG00000259944ENST00000568256ENSG00000265163ENST00000579752ENSG00000266378ENST00000584683ENSG00000266709ENST00000583262
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060457 ENSDART00000085201 N/A N/A N/A 2.800±0.15 N/A N/A 60.557±29.77 23.697±8.53 0.660±0.00 N/A 36.995±0.00 N/A N/A N/A
ENSDART00000146142 N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A
ENSDARG00000086645 ENSDART00000125900 N/A N/A N/A 3.549±1.02 N/A N/A 0.955±0.94 0.862±0.86 1.153±0.00 N/A 0.786±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109099 ENST00000312280 N/A N/A N/A 11.639±0.00 25.594±0.00 2.142±0.00 13.306±10.78 N/A 4.535±0.00 13.518±9.96 N/A 12.127±0.00 N/A 1.395±0.00
ENST00000395936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.228±0.00 31.460±0.00 4.079±0.00
ENST00000395938 110.855±0.00 52.693±0.00 N/A 49.102±30.91 30.812±16.32 104.830±0.00 20.199±16.62 13.847±12.76 9.155±4.34 49.516±44.00 67.701±31.62 29.517±23.61 72.047±24.81 26.424±20.27
ENST00000426385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494511 N/A N/A 1.401±0.00 27.934±0.00 10.054±0.00 N/A N/A N/A 10.242±0.00 6.640±0.00 N/A N/A N/A N/A
ENST00000580497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612492 N/A N/A N/A N/A N/A 7.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125430 ENST00000360954 0.480±0.00 1.565±0.00 0.406±0.00 0.412±0.13 0.323±0.02 0.588±0.04 0.364±0.01 2.712±1.06 4.090±3.70 0.382±0.25 0.051±0.02 0.973±0.69 1.115±0.34 0.251±0.10
ENST00000466596 N/A 0.931±0.00 0.226±0.00 N/A 0.177±0.01 0.484±0.15 0.127±0.00 1.618±0.19 5.195±0.00 0.849±0.30 0.298±0.00 0.530±0.33 1.198±0.37 0.396±0.10
ENSG00000205325 ENST00000379640 0.023±0.00 0.079±0.00 N/A 0.034±0.00 0.108±0.00 0.035±0.00 0.015±0.01 0.055±0.00 0.034±0.00 0.023±0.00 0.019±0.00 0.007±0.00 0.174±0.15 0.075±0.01
ENSG00000226156 ENST00000441860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.09
ENSG00000230647 ENST00000436469 N/A 0.188±0.00 N/A 0.026±0.01 0.082±0.05 0.141±0.00 N/A 0.106±0.00 0.311±0.00 0.030±0.00 0.015±0.00 0.050±0.01 N/A 0.075±0.00
ENSG00000230897 ENST00000412454 0.992±0.00 1.189±0.00 N/A 0.236±0.00 0.675±0.00 0.574±0.00 0.159±0.00 0.629±0.00 0.098±0.02 0.475±0.00 1.612±0.00 0.524±0.06 0.124±0.00 0.467±0.00
ENSG00000232058 ENST00000446671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.04
ENSG00000238212 ENST00000445035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.526±0.76
ENSG00000259944 ENST00000568256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00
ENSG00000265163 ENST00000579752 N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A N/A N/A N/A 0.502±0.06
ENSG00000266378 ENST00000584683 0.127±0.00 N/A 0.198±0.00 0.065±0.05 0.395±0.00 0.661±0.00 0.042±0.00 0.270±0.10 0.066±0.04 0.173±0.04 0.080±0.00 0.124±0.07 0.284±0.34 0.236±0.04
ENSG00000266709 ENST00000583262 0.168±0.00 0.236±0.00 0.033±0.00 0.142±0.00 0.099±0.01 0.600±0.00 0.136±0.02 0.631±0.32 0.386±0.00 1.013±0.71 N/A 0.288±0.15 0.393±0.32 0.162±0.04

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