C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360954 HS3ST3B1-001 ENSG00000125430 9606 + 17:14301083-14349404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360954 0.480±0.00 1.565±0.00 0.406±0.00 0.412±0.13 0.323±0.02 0.588±0.04 0.364±0.01 2.712±1.06 4.090±3.70 0.382±0.25 0.051±0.02 0.973±0.69 1.115±0.34 0.251±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y3 CIL_0005Y3_0002 CGP 17:14301083-15265326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0008146 IEA sulfotransferase activity
GO:0008467 TAS [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0015012 TAS heparan sulfate proteoglycan biosynthetic process
GO:0015015 TAS heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0033872 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 3 activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094103 Hs3st3b1-001 protein_coding Mus_musculus 0 1779
ENSMUST00000058652 Hs3st3a1-001 protein_coding Mus_musculus 0 965
ENSMUST00000084628 Hs3st2-201 protein_coding Mus_musculus 0 383
ENSDART00000083040 hs3st2-001 protein_coding Danio_rerio 0 372
ENSMUST00000044922 Hs3st6-201 protein_coding Mus_musculus 0 313
ENSMUST00000177999 F930015N05Rik-201 protein_coding Mus_musculus 0 233
ENSDART00000125900 hs3st3b1b-001 protein_coding Danio_rerio 9e-30 137
ENSMUST00000123555 Parp3-004 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000067218 Parp3-001 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000055984 Isg20l2-001 protein_coding Mus_musculus 0.0000002 64

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