C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 53
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126106 TMEM53 9606 - 1:44635238-44674555 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372235 TMEM53-008 44654465-44674443 protein_coding
  ENST00000372237 TMEM53-001 44653247-44674555 protein_coding
  ENST00000372242 TMEM53-007 44635238-44674459 protein_coding
  ENST00000372243 TMEM53-003 44635238-44674462 protein_coding
  ENST00000372244 TMEM53-005 44635238-44674477 protein_coding
  ENST00000420706 TMEM53-009 44654896-44674402 protein_coding
  ENST00000468117 TMEM53-004 44653247-44674477 processed_transcript
  ENST00000476724 TMEM53-002 44653247-44674442 processed_transcript
  ENST00000495630 TMEM53-006 44636048-44674466 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLiverLungENST00000372235ENST00000372237ENST00000372242ENST00000372243ENST00000372244ENST00000476724
Transcript ID Adipose Bladder Colon Heart Kidney Liver Lung
ENST00000372235 19.139±0.00 N/A N/A N/A N/A 25.614±0.00 N/A
ENST00000372237 N/A N/A N/A N/A N/A 3.260±0.00 N/A
ENST00000372242 N/A 0.700±0.00 N/A N/A N/A 5.930±0.00 N/A
ENST00000372243 N/A N/A N/A 0.631±0.00 N/A N/A 1.138±0.00
ENST00000372244 N/A N/A 1.494±0.00 N/A N/A N/A N/A
ENST00000476724 N/A N/A N/A N/A 0.890±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0001 VISTA 1:44224152-44825477

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038789 tmem53 transmembrane protein 53 protein_coding Danio_rerio
ENSMUSG00000048772 Tmem53 transmembrane protein 53 protein_coding Mus_musculus

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