C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: kinectin 1 (kinesin receptor)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126777 KTN1 9606 + 14:55559072-55701526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334975 KTN1-009 55667651-55684583 retained_intron
  ENST00000395308 KTN1-005 55580324-55680718 protein_coding
  ENST00000395309 KTN1-201 55611977-55680718 protein_coding
  ENST00000395311 KTN1-003 55601792-55684579 protein_coding
  ENST00000395314 KTN1-002 55580317-55684579 protein_coding
  ENST00000413890 KTN1-202 55611977-55684583 protein_coding
  ENST00000438792 KTN1-004 55580315-55684579 protein_coding
  ENST00000459737 KTN1-001 55580322-55684579 nonsense_mediated_decay
  ENST00000553360 KTN1-016 55641749-55661586 nonsense_mediated_decay
  ENST00000553624 KTN1-018 55661249-55672697 protein_coding
  ENST00000553710 KTN1-022 55679663-55684253 nonsense_mediated_decay
  ENST00000554294 KTN1-023 55672930-55701526 protein_coding
  ENST00000554306 KTN1-017 55656100-55661857 retained_intron
  ENST00000554507 KTN1-006 55644275-55684260 protein_coding
  ENST00000554567 KTN1-015 55580210-55637341 protein_coding
  ENST00000554570 KTN1-021 55656102-55663196 protein_coding
  ENST00000554831 KTN1-012 55675050-55683723 retained_intron
  ENST00000554890 KTN1-019 55644286-55652875 protein_coding
  ENST00000555164 KTN1-020 55651890-55656347 retained_intron
  ENST00000555172 KTN1-008 55663343-55684576 retained_intron
  ENST00000555498 KTN1-014 55580254-55612273 protein_coding
  ENST00000555506 KTN1-011 55671862-55674304 retained_intron
  ENST00000555573 KTN1-007 55661274-55684576 protein_coding
  ENST00000556631 KTN1-010 55671315-55684579 retained_intron
  ENST00000557267 KTN1-013 55559072-55612230 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395308ENST00000395309ENST00000395314ENST00000413890ENST00000438792ENST00000459737ENST00000554507ENST00000555573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395308 N/A N/A N/A 1.221±0.00 N/A N/A 11.238±0.00 N/A 3.150±0.00 N/A N/A N/A N/A N/A
ENST00000395309 N/A N/A N/A 4.815±3.75 N/A N/A N/A N/A N/A N/A N/A 29.458±0.00 21.560±0.00 96.395±0.00
ENST00000395314 12.611±0.00 18.237±0.00 5.012±0.00 3.772±2.17 9.160±3.00 12.347±7.54 10.715±0.00 15.206±6.95 5.427±0.57 8.569±4.42 17.822±15.53 13.425±9.31 6.934±4.45 19.247±0.00
ENST00000413890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.082±0.00 N/A N/A N/A
ENST00000438792 10.623±0.00 N/A 2.357±0.00 4.967±1.47 8.848±0.27 10.330±2.95 22.804±15.90 7.101±0.14 8.364±1.76 11.434±0.19 21.132±0.00 16.270±10.34 11.952±11.57 65.580±35.98
ENST00000459737 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.290±0.00 1.832±0.00 2.827±0.00 0.819±0.00 N/A
ENST00000554507 12.610±0.00 21.163±0.00 N/A 9.473±0.00 17.566±0.00 22.917±0.00 N/A 18.610±0.00 N/A 12.292±0.00 N/A 11.243±1.67 3.060±0.00 33.046±0.00
ENST00000555573 N/A N/A N/A N/A N/A N/A N/A N/A 6.099±0.00 N/A N/A 14.444±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000604 CIL_000604_0002 CGP 14:55559072-56301526

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007018 IEA microtubule-based movement
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 TAS integral component of membrane
GO:0019894 IEA kinesin binding
GO:0030176 IEA integral component of endoplasmic reticulum membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032802 ktn1 kinectin 1 protein_coding Danio_rerio
ENSMUSG00000021843 Ktn1 kinectin 1 protein_coding Mus_musculus

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