C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calnexin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127022 CANX 9606 + 5:179678628-179730925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000247461 CANX-001 179698906-179730925 protein_coding
  ENST00000452673 CANX-005 179698906-179730925 protein_coding
  ENST00000502296 CANX-006 179698406-179708336 protein_coding
  ENST00000502498 CANX-007 179698944-179709036 protein_coding
  ENST00000502673 CANX-003 179698977-179720494 protein_coding
  ENST00000503126 CANX-016 179706307-179716241 processed_transcript
  ENST00000503303 CANX-011 179726705-179729649 processed_transcript
  ENST00000504579 CANX-020 179698968-179709059 nonsense_mediated_decay
  ENST00000504734 CANX-002 179698417-179728907 protein_coding
  ENST00000505090 CANX-012 179723478-179726735 retained_intron
  ENST00000506298 CANX-015 179709694-179716281 retained_intron
  ENST00000506654 CANX-017 179698984-179710062 protein_coding
  ENST00000507307 CANX-008 179698956-179706322 protein_coding
  ENST00000508787 CANX-014 179708287-179716201 protein_coding
  ENST00000509563 CANX-010 179700186-179705777 protein_coding
  ENST00000510810 CANX-018 179699026-179709949 protein_coding
  ENST00000513246 CANX-009 179698977-179708256 protein_coding
  ENST00000514032 CANX-004 179698988-179728682 nonsense_mediated_decay
  ENST00000514383 CANX-021 179678628-179708366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000247461ENST00000452673ENST00000502673ENST00000504734ENST00000505090ENST00000514032
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000247461 113.821±0.00 75.188±0.00 17.040±0.00 39.138±21.99 71.351±31.75 69.058±28.59 47.884±31.50 76.335±37.67 71.115±27.25 52.958±19.69 28.887±24.25 64.652±23.63 112.076±20.67 65.972±13.58
ENST00000452673 N/A N/A N/A 8.814±0.00 N/A N/A N/A N/A N/A N/A N/A 11.042±0.00 18.212±0.00 10.861±0.00
ENST00000502673 N/A N/A 50.605±0.00 42.894±0.00 61.680±0.00 61.758±0.00 17.240±0.00 68.200±0.00 N/A 56.023±0.00 14.897±0.00 59.126±0.00 N/A N/A
ENST00000504734 53.137±0.00 N/A 19.966±0.00 37.117±26.78 30.655±3.71 66.098±0.00 7.556±0.00 26.175±0.00 27.162±0.00 16.593±0.00 21.276±0.00 35.542±16.64 N/A 54.592±0.00
ENST00000505090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 116.817±0.00 89.056±0.00
ENST00000514032 N/A N/A N/A N/A N/A N/A 7.586±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001948 IEA glycoprotein binding
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005791 IEA rough endoplasmic reticulum
GO:0005840 IEA ribosome
GO:0006457 TAS:IEA protein folding
GO:0007568 IEA aging
GO:0009306 TAS protein secretion
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030246 IEA carbohydrate binding
GO:0030424 IEA axon
GO:0032839 IEA dendrite cytoplasm
GO:0034185 IEA apolipoprotein binding
GO:0035255 IEA ionotropic glutamate receptor binding
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0043234 IEA protein complex
GO:0043687 TAS post-translational protein modification
GO:0044233 IDA ER-mitochondrion membrane contact site
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0048488 ISS synaptic vesicle endocytosis
GO:0051082 IEA unfolded protein binding
GO:0061077 IEA chaperone-mediated protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane
GO:0072583 ISS clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037488 canx calnexin protein_coding Danio_rerio
ENSMUSG00000020368 Canx calnexin protein_coding Mus_musculus

Loading